Arthrobacter sp. ATA002: OL239_17745
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Entry
OL239_17745 CDS
T10700
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
arta Arthrobacter sp. ATA002
Pathway
arta03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
arta00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OL239_17745
09124 Replication and repair
03420 Nucleotide excision repair
OL239_17745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arta03021
]
OL239_17745
03400 DNA repair and recombination proteins [BR:
arta03400
]
OL239_17745
Enzymes [BR:
arta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OL239_17745
Transcription machinery [BR:
arta03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
OL239_17745
DNA repair and recombination proteins [BR:
arta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
OL239_17745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WAP51593
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All DBs
Position
3606496..3608142
Genome browser
AA seq
548 aa
AA seq
DB search
MANGPLIVQSDKTILLEVDHEQATEARHAIAAFAELERAPEHIHSYRLTPLGLWNARAAG
LDAEQVLNTLLNYSRFPVPHSLLVDIEETMSRYGRLRLEKDPQHGLVLRTNDYPVLEEVL
HAKKIQPLLGPRIDGETVVVQSAMRGQLKQLLLKLGWPAEDLAGYIDGTPHPILLNEDGW
SLRPYQKLATENFWAGGSGVVVLPCGAGKTLVGAAAMATSSTTTLILVTNTVSARQWKDE
LLRRTSLTEDEIGEYSGAVKEVRPVTIATYQVLTLKRGGLYPHMELLDANNWGLIIYDEV
HLLPAPIFRMTADLQARRRLGLTATLVREDGREGEVFSLIGPKRYDAPWKDIEAQGYIAP
AECIEVRVDLPRDERVAYAMAEDGDKYRLCSTSETKTGVVEQLVRRHTGEQTLVIGQYLD
QLDELAERLDAPVIKGDTPVKERQRLFGEFREGRLNTLVVSKVANFSIDLPEASVAIQVS
GSFGSRQEEAQRLGRLLRPKADGRAAHFYTVVARDTLDQDFAAKRQRFLAEQGYAYSILD
ATDIEKPV
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctaacggaccgttgattgtccaaagtgataagaccattttgctggaggtggaccat
gagcaggccaccgaggcccggcatgccatcgcggctttcgccgagctggagcgtgccccg
gagcacatccacagctaccggctgactccgctgggactgtggaacgcccgggccgcaggg
ctcgacgccgagcaggtactgaatacgctgctgaattactcccgctttccggtgccgcac
tcgctgctggtggacattgaggaaacgatgtcccgctacggaaggctgcgcctggaaaag
gacccgcagcacggtcttgtgctgcgcaccaacgattacccggtgttggaggaagtcctc
catgccaagaaaatccagcccctgctgggcccgcggatcgacggcgaaaccgtagtggtg
cagtccgccatgcggggccagctcaagcagctgctgctgaagctcggctggccggcggag
gacctggccggctacattgacggcacgccgcatccgatcctgctcaacgaggacggctgg
agcctgcgcccgtaccagaagctggccacggagaacttctgggccggcggctccggcgtc
gtcgtcctgccctgcggtgcgggcaagaccctggtgggcgcggccgccatggccaccagc
tccaccaccaccctgatcctcgtcacgaacaccgtctcggcccggcagtggaaggatgag
ctgcttcggcgcacctccctgaccgaggacgaaattggcgaatactccggcgccgtgaag
gaagtccggccggtcaccatcgccacctaccaggtgctgacgctcaagcggggcggcctg
tatccgcatatggaactgctggatgcgaacaactgggggctgatcatctacgacgaggtg
catctgctgcccgcgccgatcttccggatgaccgctgacctgcaggcccggcgcaggctg
gggttgaccgccactctggtgcgcgaagacggccgcgagggcgaggtcttctcgctgatt
ggccccaagcgctacgacgccccgtggaaggatattgaggcgcagggctacattgctccg
gccgagtgcatcgaggtccgggtggatctgccccgggatgagcgggtggcctatgccatg
gcagaagacggggacaaataccggctgtgttcgacgtcggagaccaagaccggcgtcgtc
gaacagctggtgcgccgccacaccggcgagcagaccctggtgatcgggcagtacctggac
cagttggatgaactggccgaacgcctggacgcaccggtcatcaagggcgacactccggtg
aaggaacgccagcggctcttcggggaattccgggagggcaggctgaacaccctggtggtg
tccaaggttgccaacttctccatcgacctgcccgaggcttccgtggccatccaggtctcc
ggttccttcggctcccgccaggaggaagcccagcggctgggccggctgctgcgccccaag
gcggacggcagggccgcccacttctacaccgtggtggcccgggacaccctggaccaggac
ttcgctgccaagcggcagcggttcctcgcagagcagggctacgcctattccatcctcgat
gccactgacattgaaaagccggtgtag
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