Arthrobacter sp. PAMC25284: KY499_02900
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Entry
KY499_02900 CDS
T10986
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
artc Arthrobacter sp. PAMC25284
Brite
KEGG Orthology (KO) [BR:
artc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
artc03019
]
KY499_02900
Enzymes [BR:
artc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KY499_02900
Messenger RNA biogenesis [BR:
artc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KY499_02900
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
DEXQc_Suv3
MTR4-like_stalk
Helicase_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QYF90296
LinkDB
All DBs
Position
623420..626308
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AA seq
962 aa
AA seq
DB search
MSSQPSPESPSERYRANAERAAEAKTYLGGFIRSLDFELDDFQRESCLSLQAGRGVLVAA
PTGAGKTIVGEFAIYLALQRGLKAFYTTPIKALSNQKYAELAAKYGAAQVGLLTGDTSIN
GEAPVVVMTTEVLRNMLYADSDTLDDLGFVVMDEVHYLADRFRGAVWEEVIIHLPSEVQV
ASLSATVSNAEEFGAWLDTVRGQTDVIVSEHRPVPLWQHVMVGRKIVDLFAGDTTFDEIA
PAGEAGETVPGKAVAADVDRPGYEVNPELLSMARAESQMNFRGRFGHGGRNTRRQQQRPR
DEPQGGPRSPVRKASRPQVIASLDRQDLLPAITFIFSRAGCDAAVAQCVSAGLWLTTERE
QLMIAQRVDEAAQDVPSEDLDVLGFWSWRDGLVRGLAAHHAGMLPTFKEVVEKLFVDGLV
KAVFATETLALGVNMPARCVVLEKLDKFNGEAHVNITAGEYTQLTGRAGRRGIDVEGHAV
VLWQPGTDPAAVAGLASRRTYPLNSSFRPTYNMSINLVAQFGRARAREILESSFAQFQAD
RSVVGLAKQVRGREESLAGFSKAMTCHLGDFTEYARLRRALSDAEKNASQVTSRARKSLT
EDSLSRLLPGDVVDVPSGRAPGLAVVLSSDHHSREPRPAVMTLDNQLRRIGLPDVEGPLS
PITRIRIPKSFNAKIPKSRRDLASSVRNAIRDHRPPAPPSRDEDFGRAAAQPNQEKRITE
LRRELRSHPCHGCSEREDHARWSERWWKLRQETDGLVRQIQGRTNTIAKTFDRVCGLLSS
YGYLETSDSGVLSISRDGQRLRRIYGEKDLLISQSLRLGAFNDLDAAEVASLASVLVYQA
KREDRGLRPKMPSIALESAVDTVVREWSALEDLEEASKLPLTGEPELGLVWPIYKWARGR
HLQDVLSGTDLAAGDFVRWVKQVIDLLDQLAKIPELDPRVARLCRDAIALIKRGVVAYSS
VA
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcacaaccaagtccggagtcgccgtccgaacgctaccgggccaacgccgagcgc
gccgccgaagccaaaacgtatttgggcggattcatccgttcgcttgacttcgaactcgac
gacttccagcgcgagtcctgcctgtccttgcaagcggggcgtggcgttctcgtagcggcc
cccaccggcgccggcaagacaatcgtgggggagttcgccatctatttggcgctccagcgc
ggccttaaggccttctacaccaccccgatcaaggccctcagcaaccagaagtacgccgag
cttgcagcgaagtacggggccgcgcaggtgggcctgctcacgggcgacaccagcatcaac
ggcgaagcgcccgtcgtcgtcatgaccaccgaagtgctccggaacatgctctacgcggac
tccgacacgctcgatgaccttggcttcgtggtgatggacgaagtccactacctggcggac
cggttccgcggggcggtctgggaagaagtgatcatccacctccccagcgaggtccaggtg
gcctccctgagcgcgaccgtctccaacgccgaggagttcggcgcgtggctggacaccgtc
cgcgggcaaaccgacgtgattgtctccgaacaccgtccggtcccgctgtggcagcacgta
atggtgggccgtaagatcgtcgatctcttcgccggagacacaacgtttgacgaaatcgcc
cccgccggcgaggccggggagaccgttcccgggaaagccgtggcagccgacgtcgaccgg
cccggctacgaggtcaaccccgaacttctgtcgatggcacgtgcagagagccagatgaac
ttccgcggccgcttcggccacggcggccggaatacccgcaggcagcagcagcgtccgcgt
gacgagccgcagggcgggccccggagtccggtccgcaaggcgagtcgtccccaggtcatc
gccagcctggaccggcaggacctgctgcccgcgatcactttcatcttctcccgcgccggc
tgcgacgccgccgtcgcccagtgtgtctccgcgggcctgtggctgaccacggaacgtgag
cagctgatgatcgcgcagcgtgtggatgaggccgcccaggatgtgccctccgaggatctt
gacgtcctgggattctggagctggcgggacgggctggtccggggtctcgccgcgcaccat
gccggcatgctgccgaccttcaaggaggtcgtggaaaagctcttcgtcgacggtctggtg
aaggctgtttttgccaccgaaaccctcgccctcggtgtcaacatgccggcccggtgcgtc
gtactggagaagctggacaaattcaacggtgaggcacacgtcaatatcacggcgggggag
tacacccagctgaccgggcgggccggacgccgcgggatcgacgttgaagggcacgccgta
gtgctgtggcaacccggcactgacccggcggccgtcgcgggcctcgcctcgcgccgtacg
tacccgctgaattccagcttccggcccacttacaacatgtccatcaacctggtggcgcag
ttcggccgcgcccgggcacgggaaatcctggagtcttccttcgcccagttccaggccgac
cgttccgtcgtcgggctggccaaacaagtccgcggccgggaggagtccctggccggattc
agcaaggcgatgacctgccatctgggcgactttaccgaatatgcccggctgcggcgtgcc
ctgtccgatgcggaaaagaacgcctcgcaggtaacctcccgggccaggaaatcgctgacc
gaagactcgctcagccgactgctgcctggcgacgtggtggatgttccttcggggcgggct
ccgggactcgctgttgtcctcagttccgaccaccactcccgcgagccacgcccggccgtg
atgacccttgacaaccagctccgccggatcgggctgcccgacgtcgaggggccgctgtcc
ccgattacccggatcaggatcccgaagtccttcaacgccaagatccccaagtcccgccgg
gacctcgcttcctcggtccggaacgctatccgggaccaccggcctcccgcaccgccgagc
cgggatgaggacttcggccgcgccgccgcccagcccaaccaggagaagcggatcaccgaa
ctgcgccgggagctccggtcacacccctgccacgggtgcagcgaacgggaggaccacgcg
cggtggtccgaacgctggtggaagctccggcaggagacggacgggctggtgcgccagatc
cagggccggaccaacaccatagcgaaaaccttcgaccgggtctgcgggctcctctccagc
tacgggtatctggaaacctcggattccggggttctgtcgatcagccgggacggacagcgc
cttcggcggatctacggcgagaaggacctgctcatttcccaatcccttcggttgggcgcg
ttcaacgatctggacgctgccgaagtggcgtcgctggccagcgttctggtctaccaggcc
aaacgggaggaccgcggactgcgtccgaaaatgcccagcatcgcgctggaatccgccgta
gacaccgtggtgcgagaatggtccgccctggaggacctcgaggaggccagcaagctgccg
ctgaccggcgagcctgagctcggcctcgtctggcctatctacaagtgggccagaggccgg
cacctccaagatgtcctcagcggcacggacctcgccgcgggagattttgtccgctgggtg
aaacaggtgattgacctgctcgaccagctggccaagatcccggagctggatccccgcgtc
gcccggctgtgccgggatgccatcgcgctgatcaagcgcggcgtcgtcgcttattcctcc
gtggcctag
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