Arthrobacter sp. PAMC25284: KY499_15035
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Entry
KY499_15035 CDS
T10986
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
artc Arthrobacter sp. PAMC25284
Brite
KEGG Orthology (KO) [BR:
artc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
artc03032
]
KY499_15035
03400 DNA repair and recombination proteins [BR:
artc03400
]
KY499_15035
Enzymes [BR:
artc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KY499_15035
DNA replication proteins [BR:
artc03032
]
Prokaryotic type
DNA Topoisomerases
KY499_15035
DNA repair and recombination proteins [BR:
artc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KY499_15035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QYF89390
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All DBs
Position
3249625..3250614
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AA seq
329 aa
AA seq
DB search
MRLRRSNASGRGYRRLPAGTGFSYKDLDGSTLPAGTVRDRLESLGIPPAWTDVWIAPFDN
GHIQATGVDAVGRRQYIYHPAWRERKDRLKFDRSMQLAETLPTARRLVTLDLRSDGLSRE
RILAAAFRMLDSGSLRVGSERYTNENGSHGLSTLLCAHVAVRKDDLLLSFPAKSGKTWDS
RISDADLAAVVRQLKRRGGNARLLAYKEGRNWRPVVSSDINDYVKERTGADFTAKDFRTL
RGTVAAAVRLAQDGPQPKVSARKSAISRAMQDAAAVLGNTPSIARKSYVDPRLLDHFAAG
ETIDPKRLGSAEAEVRALLYRDGDVVPFQ
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctgcggcgcagcaacgcctcggggcggggctaccgccggcttccggccggcacg
gggttcagctacaaagacctggacggatccaccctgcccgcaggcaccgtgcgggaccgg
ctggaaagcctcgggatcccgccggcctggacggacgtctggatcgcccccttcgacaac
gggcacatccaggcgaccggggtcgacgccgtcggccggcgccagtacatctaccacccc
gcctggcgcgagcggaaggaccggctcaagtttgaccggtcaatgcagctcgccgagacg
ctgcccacggcgcggcgcctcgtcacgctcgacctccgctccgacggattgtcccgggaa
cgcatcctcgccgcggcgttccggatgctggacagcggatccctgcgggtcggatccgaa
cggtacaccaacgaaaacggcagccatggcctctccaccctgctctgcgcgcacgttgcc
gtgcgtaaagatgacctgctgctcagcttccccgccaagagcggcaaaacctgggactcg
cggatctccgacgccgacctcgccgccgtcgttcgccaactcaagcgccgcggcggaaac
gcccggctcctcgcctacaaggaaggccggaactggcgcccggtggtcagttccgacatc
aacgactacgtcaaagagcgcacgggcgcggacttcacggccaaggatttccggacactc
cggggcacggtggcggcggcggtccgcctggcgcaggacggtccgcagccgaaagtctcg
gcgcggaagtcggccatcagccgggccatgcaggatgctgcggccgtgctgggcaatacg
ccgtcgatcgcccgcaagagctatgtggacccccggctcctggaccacttcgccgcgggc
gaaacgattgatccgaagcgtctgggctccgccgaagccgaggtccgggcgctgctgtac
cgcgacggggacgtcgtcccgtttcagtga
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