Arthrobacter sp. PAMC25284: KY499_15255
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Entry
KY499_15255 CDS
T10986
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
artc Arthrobacter sp. PAMC25284
Pathway
artc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
artc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KY499_15255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
artc03019
]
KY499_15255
03009 Ribosome biogenesis [BR:
artc03009
]
KY499_15255
Enzymes [BR:
artc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KY499_15255
Messenger RNA biogenesis [BR:
artc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KY499_15255
Ribosome biogenesis [BR:
artc03009
]
Prokaryotic type
rRNA helicases
KY499_15255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
HEM4
UvrA_inter
Ribosomal_L12_N
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QYF89427
LinkDB
All DBs
Position
3293170..3295293
Genome browser
AA seq
707 aa
AA seq
DB search
MPENQNNSVDTETIESDVETSETAATAADSSTDTPVTTEVEAPSAAEAAPAAEAPAKSED
TTKSEETEDEGVKFVDLGIDGRVLAALQDVGYEKPSPIQAATIPLLLEGRDVVGLAQTGT
GKTAAFAVPALSRLAELHDLNGPSRKTQALVLAPTRELALQVAEAFTSYAKHIDDFTVLP
VYGGSAYGPQLAGLRRGAQVVVGTPGRVIDHISKGSLDLSELQYLVLDEADEMLRMGFAE
DVEQIFQQTPAGRQVALFSATMPSQIRRLSKQYLNNPAEVQVKSKTTTGANTRQRYLQVM
GPHKLDALTRILEVEEFEGVIAFVRTKMATEDLADKLRSRGFQAAAINGDIPQQQRERTV
EALRDGKIDILVATDVAARGLDVERVSHVVNYDIPHDTESYVHRIGRTGRAGRSGDAILF
MTPREKYLLRSIEKATRQPVEQMHLPTAETVNTLRLGKFAQRITETLESEDVAAFRDLIS
SYEEEHNVPASEIAAALAVMAQGGQSLLVKELPAAPEFQKRERAKDGFGSRGPTRTLTEG
NATYRIAVGRRQRVMPGSIVGAIANEGGISSAQIGGIDIRSDHSLVELPADLSADQLKAL
SRTRIGGELIHLELDNGRKPSGDRGSYQGNRGGDRGGFSGGGDRGGNSGAGNFKGNGGFK
REFRKTDGERSSADRGGRSFSDRNERGVSSDPRKPRTEGGFKPRNKW
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaaatcagaacaactccgtcgacaccgagaccatcgaaagcgacgtcgagact
tctgaaacggctgcaaccgcagccgactccagcaccgacaccccggtcaccaccgaggtt
gaggcgccgtccgctgctgaggcagcccccgccgccgaggctccggccaagtccgaggac
accaccaagtccgaggaaaccgaagatgagggcgtcaagttcgttgacctcggcatcgac
ggccgcgtcctggccgcactgcaggacgtcggctacgagaagccgtccccgatccaggca
gcaaccattccgctgctgctcgaaggccgcgacgtcgtgggcctggcccagacaggtacc
ggtaagactgcagcattcgcagtaccggcgctgtcccggctcgccgagctccacgacctc
aacggtccttcccgcaagacccaggccctcgtcctggctcccacccgcgagctggccctc
caggttgccgaggccttcacctcctacgccaagcacatcgatgatttcaccgtcctgccg
gtctacggcggctccgcctacggcccgcagctcgctggcctgcgccgcggtgcccaggtc
gtcgtcggcacccccggccgcgtgatcgaccacatctccaaggggtccctggacctgtcc
gaactccagtacctggtgctggatgaggctgacgagatgctgcgtatgggcttcgcggaa
gacgtcgagcagatcttccagcagaccccggcaggccgccaggtggcgctgttctcggcc
acgatgccgagccagatccgccgtctgtccaagcagtacctgaacaacccggccgaggtg
caggtcaagtccaagaccaccacgggcgccaacacccgccagcgttacctccaggtcatg
ggcccgcacaagctcgacgcgctgacccgtatcctcgaggttgaagagttcgagggcgtc
atcgcgttcgtgcggaccaaaatggccaccgaggacctcgccgacaagctgcgctcccgc
ggattccaggctgccgccatcaatggcgacatcccgcagcagcagcgcgagcggaccgtt
gaggccctgcgcgacggcaagatcgacatcctggtcgccaccgacgtcgccgcccgcggc
ctggacgtcgagcgcgtcagccacgtggtcaactacgacatcccgcacgacaccgagtcc
tacgtgcaccgcatcggccgcacgggccgcgccggccgttccggcgacgcgatcctgttc
atgacgcctcgggagaagtacctgctgcgttcaatcgagaaggccacccgccagcccgtc
gagcagatgcacctgcccacggccgagaccgtcaatacgctgcgcctgggcaagtttgcc
cagcgcatcacggagacgctcgagtccgaggacgtagcagcgttccgcgacctcatctcc
tcctacgaggaagagcacaacgtgccggcctcggagattgccgcggccctggccgttatg
gcccagggcggacagtcgctcctggtcaaggaactgccggcagctccggaattccagaag
cgcgagcgcgccaaggacggcttcggctcccgcggcccgacccgcaccctgactgagggc
aacgccacctaccggatcgccgtcggacgccgccagcgcgttatgccggggtccatcgtg
ggcgccatcgccaacgagggcggcatttcctcggcccaaatcggcggcattgacatccgt
tcggaccactccctcgtggagctcccggcggacctgagtgccgaccagctcaaggcgctg
tcccgcacccggatcggcggcgagctgatccacctcgaactggacaacggccgcaagcct
tccggcgaccgcggcagctaccagggcaaccgcggcggcgaccgcggtgggttctccggc
ggcggcgaccgtggcggcaactccggagccggcaacttcaagggcaatggcgggttcaag
cgcgaattccgcaagaccgacggcgagcggtcctccgcagaccgtggcggccgctccttc
agtgaccgcaacgagcgtggcgtgtcctcggacccccgcaagccgcgcaccgaaggcggc
ttcaagccccgcaacaagtggtaa
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