Arthrobacter sp. EM1: QI450_04330
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Entry
QI450_04330 CDS
T11381
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
arte Arthrobacter sp. EM1
Pathway
arte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QI450_04330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arte03019
]
QI450_04330
Messenger RNA biogenesis [BR:
arte03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QI450_04330
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NCBI-ProteinID:
WGZ80449
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Position
974722..976413
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AA seq
563 aa
AA seq
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MTQTALPGLVTPPKLLKDTLRIVPLGGLGEIGRNMTVFEIDGKLLIVDCGVLFPEETQPG
VDLILPDFSYIRNRVDDIVAVVLTHGHEDHIGAVPYLLRLRADIPLVGSQLTLALIEAKL
QEHRIKPVTQTVVEGQVQKFGPFECEFVAVNHSIPDALAVFLRTPGGTVLHTGDFKMDQL
PLDGRITDLRHFAKLGEEGVDLFMSDSTNADVPGFTTAEKEIGPTLDRLFGQASKRLIVA
SFSSHVHRVQQVLDAAANHNRKVAFVGRSMVRNMAIAEKLGYLDVPPGILVDIKNIDNLP
DNRVVLMSTGSQGEPMAALSRMANGDHRVVVGQGDTVILASSLIPGNENAVFRIINGLLK
LGADVIHKGNAKVHVSGHAAAGELLYCYNILEPLNAMPVHGETRHLIANGKIALDSGVPE
ESILLADNGTVIDLRDHQADIVGQVEVGFVYVDGSSVGEVTESDLKDRQTLGDEGFISII
TVIHRATGKVVSGPEIHARGVAEDDSVFDEIIPKINAALEEAVLNRSDHTTHQLQQVVRR
VVGTWVNRKLRRKPLIIPVVLEA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaaccgcccttcccggccttgttacgccgccgaaactgctcaaggacaccctg
cggatcgttccgctcggcggcctcggggagattggccgcaacatgacagtcttcgaaatc
gacggaaagctgctgattgtcgactgcggcgtcctctttcctgaggaaacccagcccggc
gtggacctgatcctgcccgatttctcctacatccggaaccgcgtcgatgacatcgttgcc
gtcgtcctgacccacggccacgaggaccacatcggcgctgttccctacctgctgcggctg
cgggcagacattcccctggtgggatcccagctgaccctggcgctcatcgaggcgaagctg
caggagcaccggatcaagccggtcacccagaccgtcgtcgagggccaggtccagaaattc
gggccgttcgaatgcgaattcgtggccgtcaaccactcgatccctgacgcccttgccgtg
ttcctgcgcacgcccggcggaaccgtgctgcacaccggcgacttcaagatggaccagctg
ccgctggacggccgcatcaccgatctccgccacttcgccaaactgggcgaagaaggtgtg
gacctgtttatgtcggactccaccaatgccgacgtgcccggcttcaccacggccgaaaag
gaaatcggcccgaccctggaccggctcttcggccaggcgtccaagcgcctgattgtcgcg
tcgttctcctcgcatgtgcaccgcgtccagcaggtcctggacgccgccgccaaccacaac
cgcaaggttgccttcgtcggccgctccatggtccgcaacatggccatcgccgagaagctc
ggctacctcgacgtgccgccgggcatcctcgtcgacatcaagaacatcgacaacctgccg
gacaaccgtgtggtcctgatgtccaccggttcccagggcgagccgatggcggccctgtcc
cgcatggccaacggtgaccaccgcgtcgtcgtcggccagggcgatactgtcatcctcgcc
tccagcctcatcccgggcaacgagaacgccgtcttccgcatcatcaacggcctgctgaag
ctcggtgccgacgttatccacaagggcaacgccaaggtgcacgtctccggccacgccgcg
gccggcgagctgctgtactgctacaacatcctcgagccgctcaacgcgatgccggtgcac
ggtgagacccggcacctgatcgccaacggcaagattgccctggactccggtgtcccggaa
gagagcatccttctcgcggacaacggaacggtcatcgatctccgtgaccaccaggccgac
atcgtcggccaggtcgaagtcggcttcgtctacgtcgacggctccagcgtcggggaagtc
acggaatctgacctcaaggaccgtcagacactcggcgacgaaggatttatttccatcatc
accgtgatccaccgcgccaccggcaaggtcgtctccggacccgagatccacgcccgcggc
gtggccgaggacgactcggtctttgacgagatcatccccaagatcaacgccgccttggaa
gaggccgtgctcaaccgctcggaccacaccacccaccagctgcagcaggtcgttcgccgc
gtggttggtacctgggtcaaccgcaagctccgccgcaagcccctgatcatcccggtggtc
ctggaggcctaa
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