Arthrobacter sp. PGP41: C3B78_01945
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Entry
C3B78_01945 CDS
T05450
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
arth
Arthrobacter sp. PGP41
Pathway
arth03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
arth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
C3B78_01945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arth03400
]
C3B78_01945
DNA repair and recombination proteins [BR:
arth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
C3B78_01945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Motif
Other DBs
NCBI-ProteinID:
AUZ33361
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Position
419438..420610
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AA seq
390 aa
AA seq
DB search
MRAIWKGAIAFGLVNVPVKVYSATEDHDISLHQVHNADGGRIRYQRRCEVCSQVIDYSDI
EKAYEEDGRTVVLSKDELKAIPAENSHEIEVVQFVPSEQLEPMMFEKSYYLEPDSKSPKA
YVLLRSALEDTDRVAIVQFALREKTRLGALRIKDDVLVLQSLLWPDEVREAKFPSLDASV
KISSQERDMSAALVESMAADFDPASFTDEYQVQLRQLIEAKLEQGESLDTEETFGVEAGE
GSKGEVIDLMEALKRSLDRKRGGGTDAAAGSPGGEARGDSGSEAGEDEGAAKPARKRSAA
GKASAANGTASASGGKTGSTARSAAAKSTATESSAAKSSTAKSSAAKSSTAKSTAAKSAA
AKSTAAGSAEKPAAKASTSKATGTRARKPA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgagagccatctggaaaggtgccatcgcgttcggcctggtcaacgtgcccgtgaaggtc
tacagcgccactgaggatcatgacatcagtctgcaccaggtccacaacgccgacggcggc
cggatccgctaccagcgccggtgcgaggtctgcagccaggtcatcgattattcggacatt
gagaaggcctacgaggaggacggccggacggtggtcctgtccaaggacgagctcaaggcc
attccggcggagaacagccacgagatcgaagtggtgcagttcgtcccgtccgagcagctt
gagcccatgatgttcgagaaaagctactaccttgagccggactctaagtctcccaaggcc
tacgtgctgctgcgcagcgcgttggaggacacggacagggtggccattgtccagttcgcg
ctgcgggagaagacccggctgggtgctttgcggatcaaggacgatgtcctggtgctccag
tccctcctgtggccggacgaggtgcgcgaagcgaaattcccttcccttgatgcgtccgtc
aagatctcctcgcaggagcgcgatatgtccgccgccctggtggagtccatggcggccgat
ttcgatcccgcctccttcacggacgagtaccaggtccagctccgccagctgattgaggcc
aagctggagcagggtgaatcgctggacaccgaggaaaccttcggcgtcgaggccggcgag
ggcagcaagggtgaagtcatcgacctgatggaggcgctgaagcgaagcctggaccggaaa
cggggcggcgggaccgatgccgcggcaggaagcccgggcggggaggcccgcggggactcc
ggcagcgaagccggcgaagacgaaggagccgccaaaccggcacgcaagcggtccgcagcg
ggtaaggccagcgccgcaaacggcacggccagtgccagcggtggaaagaccggcagcacg
gcgaggtccgccgcggcaaagtccacggcaacggagtccagcgcagccaaatccagtacg
gcaaagtccagcgcagccaaatccagtacggcaaagtccacggcggcaaaatcggccgcc
gccaagtcgacagcggccgggtccgccgagaaacctgccgccaaggcgtccaccagcaag
gcgacgggcacccgggcgcgcaagcctgcgtga
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