Arthrobacter sp. PGP41: C3B78_02430
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Entry
C3B78_02430 CDS
T05450
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
arth
Arthrobacter sp. PGP41
Pathway
arth03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
arth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C3B78_02430 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arth03400
]
C3B78_02430 (xth)
Enzymes [BR:
arth01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
C3B78_02430 (xth)
DNA repair and recombination proteins [BR:
arth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
C3B78_02430 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
AUZ33444
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All DBs
Position
complement(510509..511315)
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AA seq
268 aa
AA seq
DB search
MKIATWNVNSLRARADRVEAWLQRSDCDVLAIQETKCKDDNFPWELFERMGYEVAHFGVS
QWNGVAIASRVGLDDVERTFLDQPSFGKAGKDPVQEARAMAATCAGIRIWSLYVPNGRSL
DDEHMPYKLKWLESLKTHAQELVMQNPEAQVALMGDWNIAPFDEDVWDIDLFVNNRYTHV
SPPERAAFHAFESAGFTDVARPYTPGPGVYTYWDYTQLRFPKKEGMRIDFVLASPALAAR
VTGASIDREERKGKGASDHAPVLVELAD
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
gtgaagattgctacctggaacgtgaactccctccgtgcccgcgccgaccgcgtcgaagcc
tggcttcagcgcagcgactgcgatgtcctggccatccaggagacgaagtgcaaggacgac
aacttcccgtgggaactctttgagcggatgggctacgaggttgcccacttcggcgtcagc
cagtggaacggggtggccatcgcttcccgcgtggggctggacgacgtggagcgcaccttc
ctggaccagccctcgttcggcaaggccggcaaggaccccgtgcaggaagcccgtgccatg
gctgccacctgcgccggtatccgcatctggagcctctatgtccccaacggccgttccctg
gacgacgaacacatgccgtacaagctcaaatggctggagagcctgaagacgcacgcccag
gaactggtcatgcaaaaccccgaagcccaggtggcgctgatgggcgattggaacatcgcc
ccgttcgacgaggacgtctgggacatcgacctcttcgtcaacaaccggtacacccacgtc
agcccacccgagcgtgctgccttccatgccttcgagtcggcaggcttcaccgacgtggcg
cgcccgtacaccccgggcccgggcgtctacacgtactgggattacacccagctgcgcttt
cccaaaaaagaggggatgcggatcgacttcgtactggccagcccggccctggcggcgcgc
gtgaccggcgcttcgatcgaccgcgaggagcgcaagggcaagggcgcctcggaccacgcc
cccgtgctggtggaactggcggactaa
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