Arthrobacter sp. PGP41: C3B78_04240
Help
Entry
C3B78_04240 CDS
T05450
Name
(GenBank) ABC transporter
KO
K03701
excinuclease ABC subunit A
Organism
arth
Arthrobacter sp. PGP41
Pathway
arth03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
arth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C3B78_04240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arth03400
]
C3B78_04240
DNA repair and recombination proteins [BR:
arth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C3B78_04240
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C3B78_04240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
AAA_21
AAA_29
nSTAND1
DnaJ_CXXCXGXG
AAA_16
AAA_33
RsgA_GTPase
MeaB
Anti-TRAP
Viral_helicase1
T2SSE
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AUZ33747
UniProt:
A0A2L0QVS4
LinkDB
All DBs
Position
complement(909379..911955)
Genome browser
AA seq
858 aa
AA seq
DB search
MQNAKHADDLQYPAPSPSADGFVRVRGARENNLRNVDVDVPRDAIVAFTGVSGSGKSSLA
FGTIYAEAQRRYFESVAPYARRLIQQGHNPKVELISGLPPAVALQQRRGAPSSRSTVGTV
TTLSNSLRMLFSRAGTYPAGSTQLDSDTFSPNTAAGACRECHGLGTAHTVTESSLVPDPS
LSIRDGAIAAWPGAWQGKNLRDILTHLGYDVDVPWRKLPRKHRDWILFTEEQPVVEVTPQ
RDRVAKPYKGRFWSARSYVLHTLADSQSASMRERVLAYMESGPCLRCSGTGLVPEALAVT
FAGRTIAELNRLPMAELAEVVRPTAALDDAGTASRRQLSGESNEVAVAITRDLLQRITVL
LDLGLGYLALGRATPTLSPGEMQRLRIATQLRSGLFGVIYVLDEPSAGLHPADAEPLLEV
LEQLKASGNSVFVVEHNMDVVRRADWLVDVGPRAGEGGGEVLYSGPVDGLAGIEASVTRP
FLFDDGGSVPHGCSSSGGAREPQEWLELTDISLHNLRGLDAEFPLGVLTAVTGVSGSGKS
TLVGKVLGEVVASALKSPVEQEDPAETLELGNVRGNHRIDRLVTVDQKPIGRTPRSNLAT
YTGLFDAVRKEFAATGQAKARGFGAGRFSFNVAGGRCETCQGEGFVAVELLFLPGSYGPC
PECEGSRYNPATLEVRYRGLNIAEVLAMTVDVASEFLAGIPAAARSLKSLRDVGLGYLRL
GQPATELSGGEAQRIKLATELQRAQRGHSLYLLDEPTTGLHPADVQLLMAQLHGLVDAGN
SVVVVEHDMAVVAGADWVIDLGPSGGDKGGQIMAAGTPAAVANSTRSRTASYLAAALGQA
TTSQHPGKSRFDNARVMS
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgctaagcacgctgatgacctgcagtaccccgctccttcaccttccgccgac
ggttttgtccgcgtccgcggagcccgcgaaaacaatctccgcaacgtggatgtggatgtc
ccgcgcgacgcgatcgtggcgttcaccggcgtctcaggctcgggcaagtcctcgctggcg
ttcggcaccatctacgccgaggcgcagcggcgctacttcgagtccgtggctccgtacgcg
cgccgcctcatccagcaggggcacaatccgaaggtggagctgatcagcggactgcctccc
gccgtcgcgcttcagcagcgccgcggcgcacccagcagccggtccaccgtgggaacagtc
accacgctctccaactccctgcgcatgcttttctcccgggccggcacctacccggcaggc
tccacccagctggactcggacaccttctcccccaacaccgccgccggcgcctgccgggaa
tgccacggcctgggcaccgcgcacacggtgacagagtcctcgctggtcccggacccgtca
ctcagcatccgggacggcgccatcgcggcgtggcccggcgcctggcaggggaagaacctg
cgggacatcctcacccacctgggctacgacgtcgacgtcccctggcgcaagctgcccagg
aaacaccgcgactggatccttttcacggaggagcagccggtggtggaggtgactccgcag
cgtgaccgggtggccaaaccgtacaagggacggttctggagcgcccggagctatgtgctc
catacgctggctgattcgcagagcgcctcgatgcgtgaacgcgtgcttgcctacatggag
tccgggccgtgcctccgctgttccgggacggggctggtgccggaggccctggccgtcacg
tttgcgggcaggaccatcgcggaactcaacaggcttccgatggcggagctcgccgaggtt
gtccgtcccaccgctgcattggacgacgccggcacggcgtcccgcaggcagctttccggg
gagtccaacgaggtggcggtggccatcacccgggacctgctgcagcgcatcacggtcctg
ctggacctcgggctgggctacctggcgctcggccgggccacccccaccctttcgcccggc
gagatgcagcggctcaggatcgccacgcagctgaggtcgggcctgttcggtgtgatctac
gtgctggatgaaccctccgccggccttcatccggcagacgccgagccgctgctggaagtg
ctggagcagctgaaagcgtccggcaactcggtattcgtggtggaacacaacatggacgtg
gtccgcagggccgactggctggtggacgtgggcccgcgcgccggcgaaggcggcggcgaa
gtgctctacagcggacctgtcgacggcctcgccgggatcgaggcgtcagtcaccaggccg
ttcctgttcgacgacggcggctctgtcccgcacggctgttccagttccggcggggccagg
gagccgcaggagtggctggaactgacggacatcagcctgcacaacctgcgcggactggat
gcagagttccccttgggcgtgctgacagccgtcaccggtgtttcaggctccggtaaatcc
actcttgtgggcaaagtcctgggcgaggtggtcgcctctgcgctcaagagcccggtggag
caggaggaccccgcggagaccctggagctgggaaacgttcggggcaaccaccgcatcgac
cggctcgtgaccgtggaccagaagcccatcggcaggaccccgcgttccaacctggccacc
tacaccggacttttcgacgccgtccgcaaggaattcgcggccaccgggcaggccaaggcg
cgcggtttcggcgccggcaggttctctttcaacgtggctggcgggcgctgcgaaacctgc
cagggcgaagggtttgtggccgtcgaactactcttcctacccggcagctacggcccctgc
ccggagtgcgagggatcccgctacaaccccgcaacacttgaggtgcggtaccggggcctg
aatatcgccgaggttctggccatgacggtggatgtcgcctccgaattcctggccggcatc
cctgctgccgcgaggagcctcaagagcctgcgggacgtgggtctcggctatttgcggctg
gggcagcccgccaccgaactctccggcggcgaggcgcagcgcatcaagctcgccaccgag
ctgcaacgggcgcagcgcggccacagcctctacctcctcgatgaaccgaccaccgggctg
catccggccgatgtgcagctcctgatggcccagctccacggcctggtggacgccggcaac
tcggtggtggtggtcgagcacgacatggcagtggtggcgggggcagactgggtcattgac
cttgggccgtcaggaggggacaagggcgggcagatcatggcagccgggacgcccgccgcc
gtcgcaaattccacccgcagccgcaccgcttcctatctggccgctgcgctcggccaggca
accaccagccaacacccaggaaaatctcgatttgataacgcccgggtgatgtcctag
DBGET
integrated database retrieval system
