Arthrobacter sp. PGP41: C3B78_07530
Help
Entry
C3B78_07530 CDS
T05450
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
arth
Arthrobacter sp. PGP41
Pathway
arth03030
DNA replication
arth03430
Mismatch repair
arth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C3B78_07530
03430 Mismatch repair
C3B78_07530
03440 Homologous recombination
C3B78_07530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arth03032
]
C3B78_07530
03400 DNA repair and recombination proteins [BR:
arth03400
]
C3B78_07530
Enzymes [BR:
arth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C3B78_07530
DNA replication proteins [BR:
arth03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C3B78_07530
DNA repair and recombination proteins [BR:
arth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C3B78_07530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AUZ34321
LinkDB
All DBs
Position
1663118..1666675
Genome browser
AA seq
1185 aa
AA seq
DB search
MTSSNNSFVHLHNHTEYSMLDGAARLGELFDETERLGMPALATTDHGYLFGAFDFWKKAT
DKGIKPIIGVEAYVTPGTARGDKSRVRWGEEHQRKDDISGGGSYTHMTLLSYNNAGMRNL
FRASSIASLDAVFGKWPRLDRELLNTYSEGLIATTGCPSGEIQTRLRLGQYREALEAAAE
FRDIFGAENYFCELMDHGLDIERRVTGDLLRLAKELNLPLVATNDLHYTHEHDAKAHEAL
LAIQSGSTLLEPTYDNGGSRFAFSGSGYYLKSPQEMRELFRDHPDACDNTLLIAERCEVS
FNTGANYMPRFPCPPGEDETSWLVKEVAKGLEYRYPGGVPDNVRAQADYELGVITSMGFP
GYFLVVADFINWAKNNGIRVGPGRGSGAGSMVAYAMRITDLDPLRHGLIFERFLNPDRVS
MPDFDVDFDDRRRSEVIDYVTRKYGDERVAMIVTYGTIKTKQALKDSSRVLGYPFSMGET
LTKALPPAVMAKDIPLADIQNPEAKRYGEAGDFRQLISTDPEAAKVFETALGIEGLKRQW
GVHAAGVIMSSDPIIDVIPIMRRIQDGQVITQFDYPTCEGLGLIKMDFLGLRNLTIISDA
LENIKMNRGIDLDLENLELDDAPSYELLARGDTLGVFQLDGGPMRSLLKLMKPDNFEDIS
AVLALYRPGPMGANAHTDYALRKNGIQEVIPIHPELKEPLAEILGGTYGLIVYQEQVMAV
AQKLAGYSLGQADILRRAMGKKKKSELDKQFAGFSQGMQDNGYSMEAVKTLWDILLPFSD
YAFNKAHSAAYGVISYWTAYLKAHYAPEYMAALLTSVGDDKDKSAIYLNECRRMGITVLP
PDVNESALNFTPVGNDIRFGMGAIRNVGVNVVEAMVAARESEGAFTSFKDYLMKVPAVVC
NKRTIESLIKSGAFDSLGHHRRALAMIHEEAIDSVITLKRNEAIGQFDLFAGFDAAESES
SLSIEIPDLPEWEKKDKLSFERDMLGLYVSDHPLQGLEGLLSQHAEMSITSVLGEDGPQD
GAIITIAGMITSLSRRIAKASGNAYARAEVEDLGGSMEVMFFGQVYGPIASVLAEDLIVV
VKGRLQKRDDGAITLNCMELSVPDLSEGLNGPLVITMPTYKATEAVVTELGDVLRTHRGN
SEVRLHLQGDTRTEIMGLPVHLRVNPSPSLFGDLKVLLGPACLDA
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
gtgacttccagcaacaactcgtttgtccatctccacaaccacaccgagtactcgatgctg
gacggcgccgccaggctcggcgagctgttcgacgaaacggagcggctgggcatgcctgcc
ctcgccaccaccgaccacggctacctcttcggggccttcgacttctggaagaaggccacg
gacaaagggatcaagccgatcatcggcgtcgaagcctatgtgactcccggaacagcacgc
ggtgacaagagccgcgtgcgctggggtgaggaacaccagcgcaaggacgatatttccggc
ggtggctcctacacccacatgaccctcctcagctacaacaacgcaggcatgcggaacctg
ttcagggcatcctccatcgcctccctggatgcagtcttcggcaaatggccgcgcctggac
cgggaactgctgaacacctactccgagggcctgatcgccaccacgggctgcccgtccggt
gaaatccagacccggctgcggctgggccagtaccgcgaggcgctggaggccgctgcggag
ttccgggacattttcggggcggagaactacttctgcgaactcatggaccacgggttggac
atcgagcggcgcgtcaccggggacctgctgcggctcgccaaggagctgaacctccccctg
gttgccaccaacgacctccactacacccatgagcacgatgccaaggcccacgaggccctg
ctggccatccagtccggttccaccctcctggaacccacctacgacaacggcgggtcccgc
ttcgccttctccggcagcggctactacctgaagtcaccccaggaaatgcgggaactgttc
cgcgaccaccccgacgcgtgcgataacaccctcctgatcgccgagcgctgcgaagtgtcc
ttcaacaccggggccaactacatgccgcggttcccctgcccgccgggggaggacgaaacc
tcctggctggtcaaggaagtggccaaggggcttgagtaccgttatccgggcggtgtcccc
gacaacgtccgtgcccaggccgactatgaactgggcgtcatcacctcaatgggcttcccc
ggctacttcctggtggtggcggacttcatcaactgggccaagaacaacggcatccgggta
ggccccggacgtggttccggcgccggctccatggtggcctacgccatgcgcatcaccgac
ctcgaccccctgcgccacggcctgatcttcgaacgcttcctgaacccggaccgcgtctcc
atgcccgacttcgacgtcgacttcgatgaccggcgccgctccgaagtcatcgactacgtg
acccggaagtacggcgacgaacgcgtggccatgatcgtcacctacggcaccatcaagacc
aagcaggcgctgaaggactcctcgcgcgtgctgggctacccgttcagcatgggtgagacg
ctcaccaaggcactgcctccggcggtgatggccaaggacatcccgctggccgacatccaa
aacccggaggccaagcgctatggcgaagcgggcgacttccgccagctcatcagcaccgac
cccgaagctgcgaaagtcttcgagaccgcgctgggcattgagggcctgaagcggcagtgg
ggcgtgcatgcagcaggcgtcatcatgtcctctgatccgatcatcgacgtcattcccatc
atgcgccggatccaggacggccaggtcattacccagttcgactaccccacgtgtgagggc
ctcggcctgatcaagatggacttcctgggcctgcggaacctgacgatcatttccgacgcc
ctggaaaacatcaagatgaaccgcggcatcgacctggacctggaaaacctggaactcgac
gacgccccttcctacgagctgctggcccgcggcgacaccctgggcgtcttccagctggac
ggcggacccatgcggtccctgctcaagctgatgaagcctgacaacttcgaagacatttcc
gccgtgctcgccctgtaccgtccgggcccgatgggtgcgaacgcccacacggactacgcg
ctgcggaagaacgggatccaggaagtcattcccatccacccggaactgaaggaaccgctt
gcggagatcctgggcggaacgtacggcctgatcgtgtaccaggaacaggtcatggcggtg
gcccagaagctggccggttactcgctgggccaggcggacatcctccgccgcgccatgggc
aagaagaagaaatcggaactggacaagcagttcgccggcttctcccagggcatgcaggac
aacggctactccatggaagccgtgaagaccctctgggacatcctgcttcccttctccgat
tacgccttcaacaaggcacactccgccgcctacggcgtcatctcctactggaccgcctac
ctcaaggcccactacgcgccggagtacatggccgccctgctgacctcggtgggtgatgac
aaggacaagtcggcgatctacctcaacgaatgccggcgcatgggcatcaccgtgctgccg
ccggacgtgaacgagtccgccctgaacttcaccccggtgggcaacgacatccgcttcggc
atgggcgccatccgcaacgtcggcgtcaacgtggtggaggccatggtggccgcccgcgaa
agcgagggcgccttcacgtccttcaaggactacctgatgaaggtccccgccgttgtctgc
aacaagcggaccatcgaatcgctgatcaagtccggggccttcgactcattgggccaccac
cgccgggccctggccatgatccacgaagaggccatcgactccgtcatcacgctcaagcgg
aacgaagcgatcggacagttcgacctcttcgcagggttcgacgcagccgaatccgagtca
tccctgagcatcgagatcccggacctgccggaatgggagaagaaggacaaactctccttc
gaacgggacatgctggggctgtacgtctcggaccaccccctgcagggcctcgaagggctg
ctgagccagcatgcggagatgagcattacctcagtcctcggcgaagacggaccgcaggac
ggcgcgatcatcaccatcgccggcatgatcacctcgctgagcaggcgcatcgccaaggcc
agcggcaacgcctacgccagggccgaagtggaggacctgggcggctccatggaagtcatg
ttcttcggccaggtctatggccccatcgcctctgtcctcgccgaggacctgatcgtggtg
gtcaagggacgcctgcaaaagcgcgacgacggcgccatcaccctcaactgcatggaactg
tccgttccggacctcagcgaggggctcaacggcccgctggtgatcaccatgcccacctac
aaggccacggaagcggtagtcaccgaacttggcgacgtcctccgtacccaccgcgggaac
tcagaagttcggctgcacctgcagggggatacccggacggagatcatgggcctgccggtc
cacctgcgcgtgaaccccagcccgtccctgttcggcgacctgaaagtgcttctcggaccc
gcctgcctcgacgcctga
DBGET
integrated database retrieval system
