Arthrobacter sp. PGP41: C3B78_07855
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Entry
C3B78_07855 CDS
T05450
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
arth
Arthrobacter sp. PGP41
Brite
KEGG Orthology (KO) [BR:
arth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arth03016
]
C3B78_07855
Enzymes [BR:
arth01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
C3B78_07855
Transfer RNA biogenesis [BR:
arth03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C3B78_07855
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
PIN_10
Motif
Other DBs
NCBI-ProteinID:
AUZ34379
UniProt:
A0A2L0QXK8
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Position
complement(1747134..1748468)
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AA seq
444 aa
AA seq
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MTPNIPENTTAGVPAADTAPHITVEGFDSPIPEIVELAAPREGVPLVIQTQSGLERCAAA
IAAGTGPAGVDAERASGFRYGQRAFLVQIRREGAGTWLIDPEPFENLDVINDALRGVEWI
LHAASQDLPCLAELGMWPDKLFDTELAARLAGLPRVGLAAVIEQLLGFGLAKEHSAADWS
TRPLPEPWLRYAALDVEVLTELREELIELLQADGKLEYAEQEFAAILAAGLPAARVDPWR
KTSGLHQIRDRRQLAAVRELWLERDSLAQKRDVAPGRLIPDSALVAAAKAMPATVPQLLG
TKGFHGRAAQREAPRWLRCIAAARDLEELPPLHLPTNAPPPPRVWADRDPEAAARLATAR
PLLQAKAESLSLPLENLLTPDYLRRVAWRPPAEITETAVAAELRALGAREWQVELATPLI
VEAFLHPQPLPAKEPKADATAAGK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgacccctaacattccggaaaacaccacggccggcgtcccggctgctgataccgcaccc
cacatcacggtggaaggctttgacagccccatccccgaaatcgttgagctcgccgccccc
cgggagggcgttccgctggtcatccagacgcagtccggcctggagcgctgcgctgcggcc
atcgccgccggcaccggaccggcgggtgtggacgccgagcgggcttccggcttccgttac
gggcagcgcgcgttcctggtccagatccggcgcgaaggcgccgggacctggctgatcgac
cccgaacccttcgagaacctggacgtcatcaacgacgccctccgcggtgtcgaatggatc
ctgcacgccgccagccaggacctgccctgcctcgcggagctgggcatgtggccggacaag
cttttcgacaccgaactcgctgcacggctggccgggctgccccgcgtgggcctggccgcc
gtcatcgagcagctgctcggcttcgggctcgccaaggagcactcggcagcggactggtcc
acccggcctctccccgaaccctggctgcggtatgccgcactggacgttgaagtcctcacg
gaactgcgggaggaactcatcgagctcctgcaggcggacggaaagctggaatacgccgag
caggagttcgctgcgatcctggccgccggattgcctgcagcccgcgtggacccgtggcgg
aagacctccggcctgcaccagatcagggaccgccggcagctggccgccgtacgtgagctg
tggctggagcgcgactccctggcacagaaacgggacgtggcaccgggacggctgattcct
gactccgccctggtggcggcggccaaagccatgccggccaccgtgccgcagctgctgggc
accaagggcttccacggccgggcggcgcaacgtgaagcgccccgctggctgcgctgcatc
gcagctgcacgggatctcgaagaactcccgccgctccacctccccaccaacgcgccgcct
ccgccccgtgtgtgggcggaccgggacccggaggccgctgcccgcctggccaccgcacgg
ccgctgctgcaggcgaaggcggagtcgctgagcctcccgctggagaacctgcttactccg
gattacctgcggcgggtagcctggcggccgccggcggaaatcaccgaaacagcagtcgcc
gccgaactgcgcgccctgggcgcacgtgagtggcaggtggaactggcgacgcccctgatc
gttgaagcgttcctgcacccgcagccgctgcccgccaaggaacccaaagcggacgccacc
gcagcggggaaatag
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