Arthrobacter sp. PGP41: C3B78_09710
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Entry
C3B78_09710 CDS
T05450
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
arth
Arthrobacter sp. PGP41
Pathway
arth03030
DNA replication
arth03410
Base excision repair
arth03420
Nucleotide excision repair
arth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C3B78_09710
03410 Base excision repair
C3B78_09710
03420 Nucleotide excision repair
C3B78_09710
03440 Homologous recombination
C3B78_09710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arth03032
]
C3B78_09710
03400 DNA repair and recombination proteins [BR:
arth03400
]
C3B78_09710
Enzymes [BR:
arth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C3B78_09710
DNA replication proteins [BR:
arth03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C3B78_09710
DNA repair and recombination proteins [BR:
arth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
C3B78_09710
NER (nucleotide excision repair)
GGR (global genome repair) factors
C3B78_09710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH
DHQS_2nd
Motif
Other DBs
NCBI-ProteinID:
AUZ36612
LinkDB
All DBs
Position
2138263..2140947
Genome browser
AA seq
894 aa
AA seq
DB search
MTGQPRLLVLDGHSMAFRAFFALPADKFSTTNGQHTNAIHGFTSMLINLIKEQQPTHIAV
AFDVSDESTHRKMEYSEYKGGRNETPREMNNQIDLIAQVMKAWGIKTITMPGYEADDILA
TLAAMGEKAGYEVLLVSGDRDAFQLITDNVFVLYPRKGVSDIPRMDAAAIEAKYFVSPGR
YSDLAALVGETADNLPGVPGVGPKTAAKWINLYGGLDGVLEHLDAIGGKVGDALRENVDA
VKRNRRLNQLHTDLELPVTLDDLYQPRPDQAALEDLFDKLEFKTIRSRLFALYGDEDKPA
AERESIDTPEYVVPANAAELSAFLDAGAGQRSAVAVDLVPGRIGEDAAALAVVREGAAAY
IDLANQDAESENVLAGWLRDPESPKVLHGFKAALKALTSRGLELEGVVDDTSISGYLIQP
DRRTYELAELAQHHLNVGIPAATAKAGQLELSFDGEDDAAADALVQAAAVVLALSSYFES
ELKERRAEQLLSTLELPVSRVLADMELAGIAIDMARMDDQIADLARVIDQAQEQAFAAIG
HEVNLGSPKQLQAVLFDELQLPKTKKIKSGYTTDAASLKNLLEKTGHEFLVQLMAHREAA
KLSQMLESLKKSVAEDGRIHTTYAQNVAATGRISSNNPNLQNIPIRSEEGRRVRGIFVVG
EGYECLLSADYSQIEMRIMAHLSGDQGLIQAYRDGEDLHRFVGSNIFHVPTEEVTSAMRS
KVKAMSYGLAYGLTSFGLSKQLEISVDEARTLMKDYFDRFGAVRDYLRGVVDQARVDGYT
ATIEGRRRYLPDLTSTDRQLRENAERIALNSPIQGSAADIIKRAMLGVHAELKAQGLKSR
MLLQVHDELVLEVAAGERGAVEKLVTEQMAAAADLSVPLEVQIGVGPSWYDAGH
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgacgggacagccgcgccttttggtgctggatggacactccatggccttccgcgcgttt
tttgcgctgcctgcggacaagttctcaacgacgaacgggcagcacaccaacgcgattcac
ggattcacctccatgctgatcaacctcatcaaggagcagcagcccacccacatagccgtg
gcgttcgacgtgtcggacgaatccacccaccgcaagatggagtacagcgaatacaagggt
ggccggaacgagaccccgcgggagatgaacaaccagatcgacctcatcgcgcaggtcatg
aaggcctggggcatcaagaccatcacaatgcccggctacgaggcagatgacattcttgcc
accctcgccgccatgggagaaaaagcagggtacgaagtgctgctggtctcgggggaccgc
gacgcgttccagctcatcaccgataacgtttttgtgctgtaccccaggaaaggcgtcagc
gacattccgcggatggatgccgccgccatcgaggcgaagtacttcgtcagccccggccgg
tattcggatctggctgcgctggtaggcgaaacagcggacaacctcccgggcgtgcccggc
gtcgggcccaagacagccgcgaaatggatcaacctttacggcgggctcgacggcgtcctg
gagcacctcgatgcgattggcgggaaggtgggcgatgcgctgcgggaaaacgtcgacgcc
gtcaagcggaaccgccgcctgaaccagctgcacacggacctcgagcttcccgtcacgctg
gacgacctgtaccagccgcggcccgaccaggcagccctggaggacctgttcgacaagctt
gagttcaagaccatccgcagccgtctctttgcgctctacggcgacgaggacaagcctgct
gcggaacgggaaagcatcgacacgccggagtacgtcgtgccggcaaatgccgccgagctg
tcagcgttcctggacgccggcgccgggcagcgctccgccgtcgccgtcgaccttgtcccc
ggccgcatcggtgaggacgccgcggcgctggccgttgtccgggaaggcgctgccgcctat
atcgacctcgcaaaccaggacgcggagtcggagaacgtcctggccggctggctgcgcgat
ccggaatcgccgaaggtcctgcacggcttcaaggccgcgctgaaggccctgacgtcccgt
ggactggagctggaaggcgtggtggatgacacctccatctccggctacctcatccagccg
gaccggcgcacctacgaactcgcggagcttgcccagcaccacctcaacgtggggatccct
gccgcgacggccaaggcaggccagctggagctctccttcgacggcgaggacgacgccgca
gccgacgcactggtccaggcggccgccgtcgtccttgccctcagcagctacttcgagtct
gaactgaaggaacgccgggccgagcagctcctgtccacgctggagctgccggtcagccgg
gtcctggcggacatggaactggccggcattgccattgatatggcgcgcatggatgaccag
atcgccgatctggcccgggtaatcgaccaggcgcaggagcaagctttcgcggcgatcggg
cacgaggtcaacctgggctctcccaagcagctccaggctgtcctgttcgacgaactccag
ctgcccaagaccaagaagatcaagtcgggctacacgacggacgccgcatctttgaagaac
ctgctggaaaagacggggcacgagttcctggtgcagctgatggcgcaccgggaggccgcc
aagctgagccagatgcttgaatccctgaagaagtccgtggccgaggacggccgcatccac
accacgtacgcacagaatgtggcagccacgggccggatctcctccaacaacccgaacctg
cagaacatccccatccgcagcgaggaaggccggcgggtccgcgggatcttcgtggtgggg
gagggctacgagtgcttgttgtccgccgattactcgcagatcgaaatgcgtatcatggcc
cacctgtccggtgaccagggcctgatccaggcctacagggacggcgaggacctgcaccgg
ttcgtcggctcgaacatcttccatgtgcccaccgaagaggtcaccagcgccatgcgctcc
aaggttaaggcgatgtcctacggcctggcctatggcctcacgtcgttcgggctgtccaag
cagctggaaatctccgtcgatgaggcccggaccctcatgaaagactatttcgaccggttc
ggcgctgtccgtgactacctccgcggcgtggtggaccaggcccgcgttgacggctacacg
gcaaccatcgagggacgccggcgctacctgccggacctcaccagcacggacaggcaactc
cgggagaacgccgaacgcatcgccctgaacagtcccatccagggctcggccgcggacatc
atcaagcgcgccatgctgggagttcatgccgagctgaaagcccaagggctgaaatcgcgg
atgctgctccaggtccatgacgaactggtcctggaagtggcagccggtgagcgcggggcc
gtggagaagctggttaccgagcagatggctgccgccgcggacctgagcgtaccgctggag
gtccagatcggcgtcggccccagctggtacgacgccggccactag
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