Arthrobacter sp. PGP41: C3B78_12395
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Entry
C3B78_12395 CDS
T05450
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
arth
Arthrobacter sp. PGP41
Brite
KEGG Orthology (KO) [BR:
arth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arth03400
]
C3B78_12395
DNA repair and recombination proteins [BR:
arth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C3B78_12395
Archaeal homologous recombinant proteins
C3B78_12395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_27
AAA_29
ABC_tran
TRAF_BIRC3_bd
Peptidase_M3_N
AAA_21
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AUZ35177
UniProt:
A0A2L0QZW9
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All DBs
Position
complement(2718949..2722017)
Genome browser
AA seq
1022 aa
AA seq
DB search
MRIHRVLISAFGPFAGTEEIDFDRLSAHGLFLLNGPTGAGKTSVLDAICFALYGSVPGAR
QDGKRLRSDHAEPAQEPAVTCEFSAQGRRFEVTRSPAWDKPSARGKNGFTTQQAKTLLRE
RVSGTWTEKSARNDEAGAEILALLGMDREQFTRVVMLPQGDFAAFLRSKATDRLDLLQKL
FGTERFESVEQELARQAQAAKEEVSLLAGRLEILAARAESETAPLGLDVAGAPSPDDAVA
RLEWLESAVNGRLAELTGRAERAEAASTECRNAVEAEAARGERRRKLDSAAARKAAVDQG
AQLLEEQLLRLARHRKAEVLHGQLLNVDAGAAKVRRAATAVESAFTLLSMAAGEDPELAQ
LELGIGEVPPADGAGAAAGCAAELGRLRSLLAVVEARVPDEDRLLGLRKRHGGLVKKQEE
LAAVLVQAGSRSEELQAERRRLQDGLQDLEQRAGAEALRRKEAAAAEELLDVVRRYGGAV
AVRDQVKVRYDEFLDSQLEAKRHWLDLREERLANAAAELAAKLVPGEHCAVCGSTDHPAP
AAGGPGGPGLAQEEEEARRIHEAAEAACAVVAHELAEASQLVAVLAGQGGETAAEEAENG
AVRARLAAAEAEAAVKELSAVRLRLEKLGAAVEAAQKSRTDAEAELARTVASLADVTEQS
AALDQALAGLRGSHRSLAQRLRALENAVAVLNKAVEAQAQLEQAEAQAAEAREQLEQALP
AAGFATAGEAREQLLEAAEATALQASVRAAQDEQARVAELFVSGDVVLALEEKSAGYEVD
PARLAALREAAVTAVQEARDADLAAGMASRCLASLRGIRAEYGDLAGSARQPAERAQMLA
GLADAAAGRGENTYRMSLNSYVLAARLEQVALAASERLVAMSDGRYLLQHTDAKAARGAK
SGLGLEVVDQWTGFHRDTSTLSGGESFMASLSLALGLADVVQQEAGGVEIETLFVDEGFG
SLDEQSLEQVMDALEGLRDGGRVVGLVSHVAEMKQRIGAQLQVLKGRNGSTLRISDAVDA
PV
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgaggatccaccgcgtcctgatctccgcgttcgggccgtttgccggtaccgaggagatc
gacttcgacaggctcagcgcccatggcctcttcctgctcaacggcccaacaggggcagga
aagaccagcgtcctggatgccatctgcttcgccctgtacggctccgttcccggggcccgc
caggacgggaaaaggctccgcagcgaccacgcggaaccggcgcaggagcctgccgtcacc
tgtgagttctcggcccagggccgccgcttcgaagtgacgcggtccccggcctgggacaag
ccgagcgcccgggggaagaacggcttcaccacgcagcaggccaagacgctgctgcgtgaa
cgcgtcagcggaacctggacggaaaagtccgcccgcaatgatgaggccggcgcggagatt
ctggccctgcttggcatggaccgggagcagttcacccgggtggtgatgctgccccagggc
gacttcgccgctttcctccgttccaaggccaccgaccggctggaccttctgcagaagctt
tttggtaccgaacggttcgaatcggtggagcaggaactggcccgccaggcgcaggcagcc
aaggaggaagtctccctcctcgccggccggctcgaaatcctggcggcgcgggcggagtcg
gagacggcccccttgggattggacgtggccggcgctccatccccggatgatgcggtggcc
cggctcgaatggcttgaaagcgcggtcaacgggcgcctggcggaactcacgggccgcgcg
gaacgggccgaagccgcaagcaccgaatgcaggaacgccgtggaagcggaagcagcgcgc
ggggagcggcgccgcaaactcgattccgccgcggcccggaaagcggccgtggaccagggg
gcgcagttgctggaggaacagctcctccggctggcccggcaccggaaggcggaggtgctg
cacgggcagctgctgaacgttgatgcaggtgccgcgaaggtccggcgggccgctactgcc
gtggagtccgcctttacgctgctcagcatggccgcaggggaagaccccgagctggcccaa
ctggagttgggaattggcgaggtcccgcctgcggacggggcaggagccgctgccggctgc
gccgccgaactggggcgcctgcgttcgctccttgccgtcgtggaggcccgcgtgccggac
gaggacaggctgctgggcctccggaagcgccatggcgggctggtgaaaaagcaggaagaa
ctcgccgccgtcctcgtgcaggcgggcagccgctccgaagaactccaggccgagcggcgc
cgcctccaggacgggctgcaggatctcgagcagcgggcgggtgccgaggccctgcggcgg
aaggaagccgcggccgcggaggagctgctcgacgtcgtcaggcgctatggcggggccgtt
gctgtccgggaccaggtcaaagtccggtatgacgagttcctggacagccagctggaagca
aaacgccactggctggacctcagggaagagcggctcgcaaacgctgctgctgagctggca
gccaagctggtccctggggagcactgtgccgtctgtggcagcaccgatcatcccgccccc
gccgcaggcggtccgggtggtccagggctcgcgcaggaggaggaagaagcgcggcgtatc
cacgaggcggcggaggccgcctgtgccgtggttgcccatgaactggcagaagccagccaa
ttggtggccgtcctggctggacaaggcggggaaacggccgcggaagaggccgaaaacggc
gcggtccgcgcgcgcctggctgctgccgaggcagaggccgcggtcaaggaactcagcgct
gtccggttgcggctcgagaagcttggggccgctgttgaagcagcacaaaaatcgaggaca
gacgcagaagccgagcttgcccggactgtggcctcgctggccgatgtgaccgaacagtcc
gccgcccttgaccaggcactggccgggctcaggggaagccaccggagcctggcccagcgg
ttgcgcgcgctggaaaacgcggtggcagtcctcaataaggcggttgaagcacaggcccag
ctggaacaggcggaggcccaggccgccgaggcacgggagcagctggaacaggctcttcct
gccgccggcttcgcaaccgccggcgaggcccgggagcagctgcttgaggccgccgaggca
actgccctccaggccagcgtgcgggccgcccaggacgagcaggccagggtggcggaactg
ttcgtttccggggatgttgtgctggcactggaagaaaagtcggccggttacgaagtggac
ccggcgcggcttgcggcgctccgggaagctgcggtcaccgccgtgcaggaagccagggac
gcggaccttgctgccggcatggcgtccaggtgcctggcctcgctccggggtatccgggcc
gagtatggcgatctggcaggatcggcgcggcagcctgccgagcgggcacagatgctcgcg
ggcctggcggatgccgcagcaggccggggcgagaacacctaccggatgagcctgaacagc
tatgtcctggccgcccgcctggagcaggtggccctggcggcctcggagcggctggtggca
atgagcgatggccggtacctgctccagcacactgatgccaaggctgcacgcggtgcaaag
tcggggcttggcctggaggtagtggaccagtggaccgggttccaccgggacacctccacg
ctgtccggaggcgagtcgttcatggcctccctgtccctggcgctcgggttggcggacgtg
gtccagcaggaggccggtggagtggagatcgagaccctgttcgtggacgaagggttcggc
agcctggatgagcagtcccttgaacaggtgatggacgcccttgagggcctccgggacggc
ggccgcgtggtggggcttgtcagtcacgtggcagagatgaagcagcggatcggcgcccag
ctccaggtcctgaaaggccggaacggatcgacgctgcggatctccgacgcggtggatgct
cccgtgtga
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