Arthrobacter sp. PGP41: C3B78_13240
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Entry
C3B78_13240 CDS
T05450
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
arth
Arthrobacter sp. PGP41
Pathway
arth03420
Nucleotide excision repair
arth03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
arth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C3B78_13240
03430 Mismatch repair
C3B78_13240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arth03400
]
C3B78_13240
Enzymes [BR:
arth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C3B78_13240
DNA repair and recombination proteins [BR:
arth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C3B78_13240
MMR (mismatch excision repair)
Other MMR factors
C3B78_13240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
HHH
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
AUZ35320
UniProt:
A0A2L0R083
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All DBs
Position
complement(2913652..2915787)
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AA seq
711 aa
AA seq
DB search
MTTEHIDGTASLEDRILGGLDAEQREVASTLNGPLCVLAGAGTGKTRAITHRIAYGVHSG
VYSPQRLLAVTFTARAAAEMRSRLRDLGAGNVQARTFHAAALRQLQFFWPQAVGGTLPNL
LDHKAQMLAEAARRLRLSTDRASIRDLASEIEWAKVSMLTPANYLENAQDRGAPGGFDLT
AVARVFQSYEDVKTDRNVIDFEDVLLITVGILQEDEKVAATVREQYRHFVVDEYQDVSPL
QQRLLDLWLGGRDELCVVGDASQTIYSFTGASPKHLLDFKARYPQANVVKLIRDYRSTPQ
VVRLANELLAGRRSGGPVADAAWATPLQLVAQRPAGPAPQFTECADDEAEAATVAQRIKA
LLDAGTPASEVAVLFRTNGQSEAYEQALAAAGIGYQLRGGERFFARKEVRDAILQLRAAT
RAVAETDSPEPLGQLVRDIVSSLGYTDSAPHSGGALRERWESLAALVALADELVQTRGAG
FGLADFVNELQERSLAQHAPTVQGVTLASLHAAKGLEWDAVFLVGLSEGLMPISFADSPE
SVDEERRLLYVGITRAREHLSLSWSTARTPGGRANRKPSRFLDGLRPDSVATSTTRGKVP
VSRRKAAAPAMCRVCGSMLATGAERKVGRCNSCPPSYEEQTFDALRNWRREVALAAEVPA
FVVFTDATLTAIAEARPASLEELAGLAGVGPSKLERYGEDVLRVLTESTSL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gtgactacagaacatattgacgggacagcatccctggaggaccgcatccttggcggcctg
gacgcagagcaacgggaagtggccagcaccctgaacggcccgctgtgtgtcctggcgggc
gcaggaaccggtaagacacgcgccatcacccaccgcattgcctacggcgtccactccggc
gtctattcgccgcagcggctgcttgccgtgaccttcacggcccgggccgctgccgagatg
cggagccggctgcgggatctcggggcgggcaacgtgcaggcgcggacattccacgccgct
gccctgcgccagctgcagttcttctggccgcaggcagttggcgggaccctgcccaacctc
ctggaccacaaggcgcagatgctggccgaggccgcccggcggctccggctcagcaccgac
agggcctccatccgcgatctcgcctccgagattgaatgggccaaggtgtccatgctcacc
ccggccaactacctggaaaacgcccaggacaggggtgccccgggagggttcgacctcacg
gccgtggcacgggttttccagtcctacgaggacgtgaagacggaccgcaacgtcattgac
ttcgaggacgtcctgctgatcacggtgggaatcctccaggaggacgagaaggtcgccgcc
accgtccgcgagcagtaccggcactttgtggtggatgagtaccaggacgtctccccgctg
cagcagcggctcctggacctctggctcggcggccgggacgaactctgcgtcgtcggcgac
gccagccagaccatctattcatttacgggcgcttcccccaagcacctcctggatttcaaa
gcacgctacccgcaggccaacgtggtcaaactgatccgggactaccgctccacgccgcag
gtcgtgaggctcgccaatgagttgctggccggccggcggagcggcggtccggtggccgac
gccgcctgggcaacacccctccagctcgtggcccagcggccggcgggcccggcaccccag
ttcaccgagtgcgcagacgacgaagcagaggcagccactgttgcccagaggatcaaggca
ctgctggacgcgggcactcccgccagcgaggtggccgtcctgttccggaccaacggccag
tccgaggcctacgaacaggccctcgctgcggccggcatcggctaccagctgcgcggcggc
gagcggttcttcgcccgcaaggaggtccgggacgccatcctgcagcttcgggccgcaacc
cgggccgtcgcggagacggattcccccgagcccctggggcagctggtccgggacatcgtc
tcgtccctcggctacacggactccgccccccacagcggcggcgcactgcgggaacgctgg
gaatcgctggcggccctggtggcgcttgccgatgaactggtccaaacccggggtgccggt
tttgggctggccgacttcgtgaacgaactccaggaacgctccctcgcccagcacgccccc
accgtccagggggtgaccctggcctcgctgcacgcggccaagggcctggaatgggatgcg
gtgttcctggtgggcctcagcgagggtctgatgcccatctccttcgccgactcgcccgag
tcggtggatgaggaacggaggctgctttacgtgggaatcacccgtgcccgggagcacctc
tcgttgtcctggtccacagcccggaccccgggcggacgggcaaaccggaaaccgtcaagg
ttcctggacgggttgcgcccggactcagtggcaacgtcaaccacccgggggaaggttccg
gtgtcccgccggaaggccgccgctcccgccatgtgccgggtctgtggaagcatgcttgcc
actggcgcggaacgcaaggtgggccgctgcaactcctgtccgccgagctacgaggagcag
accttcgatgccctgcggaactggcgccgcgaagttgccctcgccgctgaggtgcctgcg
ttcgtagtgttcaccgatgccacgctcacagccatcgctgaggcgcgccccgcctcgctc
gaggagctggccgggctggcaggagtgggcccgtccaagctggaacggtacggggaagac
gttctgcgcgtcctcacggaaagcacttccctgtga
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