Arthrobacter sp. PGP41: C3B78_16130
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Entry
C3B78_16130 CDS
T05450
Name
(GenBank) molecular chaperone DnaK
KO
K04043
molecular chaperone DnaK
Organism
arth
Arthrobacter sp. PGP41
Pathway
arth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C3B78_16130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arth03019
]
C3B78_16130
03110 Chaperones and folding catalysts [BR:
arth03110
]
C3B78_16130
03029 Mitochondrial biogenesis [BR:
arth03029
]
C3B78_16130
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arth04147
]
C3B78_16130
Messenger RNA biogenesis [BR:
arth03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
C3B78_16130
Chaperones and folding catalysts [BR:
arth03110
]
Heat shock proteins
HSP70 / DNAK
C3B78_16130
Mitochondrial biogenesis [BR:
arth03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
C3B78_16130
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
C3B78_16130
Exosome [BR:
arth04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
C3B78_16130
Exosomal proteins of breast cancer cells
C3B78_16130
Exosomal proteins of colorectal cancer cells
C3B78_16130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Motif
Other DBs
NCBI-ProteinID:
AUZ36730
LinkDB
All DBs
Position
complement(3518265..3520334)
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AA seq
689 aa
AA seq
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MSYVLAIDVGTSFTAAAVARFDQGTSSSPECLPLGIRGTSVPSVLFYPEEGPILVGEAAE
RRGLDFPARVVREFKRRVGDAVPISVGTLSLPAEDVFATMARWVADRAEEREGAPPSEII
LTHPAAWGSHRTSLLKEALAARNLQDVALVTEPEAAALHYASQVRVEEGSTIAVYDLGGG
TFDTAVLRKAGSNRFDLLGRPEGIENLGGADFDAAVLRYVAGNTGGALSSLDTSDPGARA
ALARLQRECVEAKEALSADSEASISVLLPGFQQQVRLVRSEFEALIDEPIRDTVDALEQS
LADLKLAPADLSAVLLIGGSSRIPLVAQIVSEQLDRPIAVDADPKSSICLGAAAAAVLAR
EAAAAEIAAQAAAEAGPAAAPEGAAPGHVPGRPASWSRKSTTAAGAMAGAAGQGAAHGQH
GHRGGAHAPKPTVRLTAIAAAAAAFTVLSATAAQSPEGLSSLTSIFTPKADAAPEKDSSS
AGSGGGGTGGAAAAGAGAEAQEPARGIEASASTKDSAPGTVGLEVAASPTSRPASSADGE
LAAAGSGVTGALDTAPGTTAAPGAGAGGVTEPLAAPAAPAGSTDPVPGTSEPVPGETGTA
SPVPVDPPATEEPPPPVTEEPPPPVTEEPPPATEEPSPLVTEEPPPPVAEEPPPPVTEEP
SPPAPEPTASMATESAPATDPATAAEPAV
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgttctggccattgacgtcgggaccagcttcactgctgctgccgttgcacgc
tttgatcaaggaacttcttcgtctcccgagtgcctgccactgggaatccgtggaacctcg
gtaccctccgtgctgttttacccggaggaaggccccatcctggtgggggaagctgcggaa
cgccgcggccttgatttcccggcccgggtggtgcgggaattcaagcgccgggtgggcgac
gccgtgccgatctccgtgggcacgctctccctgccggccgaggacgtcttcgccaccatg
gcccgctgggtggcggaccgcgcggaggaacgcgagggggcgccgccgtcggaaatcatc
ctgacccacccggccgcctggggcagccaccgcacctcgctcctgaaggaagccctggcc
gccaggaacctgcaggacgttgccctggtgacggagccggaagctgcagccctgcattac
gcctcccaggtgcgggtggaagagggaagtaccatcgcggtctacgaccttggcggcgga
acctttgacacagcggtcctgcggaaggccggcagcaaccgttttgacctgctgggccgc
cctgagggcatcgaaaacctcgggggagccgactttgatgcggcggtcctgcgctacgtt
gcagggaataccggcggcgccctctccagcctcgacacgtccgatcccggggcccgtgcg
gcgctggccaggctgcagcgcgaatgcgtggaagccaaggaagcgctctccgcggacagt
gaagccagcatctccgtcctgctgccgggattccagcagcaggtgcgcctggtcaggtcc
gagttcgaggcactgatcgacgagcccatccgggacacggtggacgcgctggaacagtcc
ctggccgacttgaagctggcaccggcggatctttccgccgtgctcctcattggcgggtcc
tcgaggatccccctcgttgcgcagatagtctccgaacagctggaccgccccatcgccgtc
gacgctgatcccaagtcctccatctgcctcggtgctgccgccgcggctgtcctggcgcgg
gaggcggccgccgccgagattgcggcgcaggcggcggcggaagcgggccccgccgcggca
cctgaaggcgccgcaccgggccacgtacccgggcggccggcgagctggtcccggaagagc
acgacggcggcaggcgccatggctggagccgcagggcagggtgccgcgcacggccagcac
ggacaccggggcggtgctcacgcgccgaagcctacggtgcggctgaccgccatcgcggcc
gctgctgccgcgttcactgtcctctcggccaccgcggcccagagccccgagggcctgagc
agcctgacatccatctttacccccaaagcggacgccgcccccgagaaggattcttcctca
gccggttccggtggcggcggaaccggaggcgcggcagcggccggtgccggcgcggaggcg
caggaacctgccaggggcatcgaagccagtgccagcacgaaggactccgccccgggcacc
gtgggcctggaagtggcagcctcgcccaccagcaggccggcgtccagcgccgacggggag
ctggcggctgcgggctccggcgtcacgggcgcccttgacaccgctcccggtacgactgcc
gccccgggagctggtgcaggtggagtgacggagcccctggccgctcccgccgcccctgcc
ggtagtactgatcctgttccgggaacaagcgagccagtgccaggtgaaacggggacggcg
agccctgtcccggtggacccgcctgcgaccgaggagccaccgccgcctgtgacggaggaa
ccgcctcccccggtgaccgaggagcccccgcctgcgacggaggagccatctcccctggtg
acggaggagccaccgccgcctgtggcggaggaaccccctccgcccgtaacggaggagccg
tcgcctccggcaccggagcccacggcgtccatggccacggagtccgcgccagccaccgat
ccggccacggccgctgaaccggcggtttga
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