Arthrobacter sp. Helios: ArtHe_00560
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Entry
ArtHe_00560 CDS
T11003
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
artl Arthrobacter sp. Helios
Pathway
artl03420
Nucleotide excision repair
artl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
artl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ArtHe_00560 (pcrA)
03430 Mismatch repair
ArtHe_00560 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
artl03400
]
ArtHe_00560 (pcrA)
Enzymes [BR:
artl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ArtHe_00560 (pcrA)
DNA repair and recombination proteins [BR:
artl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ArtHe_00560 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
ArtHe_00560 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
Viral_helicase1
ResIII
DEAD
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
UPO77251
LinkDB
All DBs
Position
123662..126196
Genome browser
AA seq
844 aa
AA seq
DB search
MDYLFDPYFSTPGKSKTAPGAAKEDTAHGGGAAVPEAVTPEPPAHGGHGTTHAGRSPRVD
DARAADLLRGLNPQQEEAVKHAGSPLLIVAGAGSGKTRVLSHRIAYLMATGRSNPGQILA
ITFTNKAAAEMRERIESLVGGVAKTMWISTFHSSCVRTLRREAKAVGMNSNFSIYDSADT
LRLITLVAKGLDLDPKRFAPKAIANKISGLKNELIDDESYASSANYSDPFEQAVAQVYTG
YTQRMRQANAMDFDDLIAQTVYMFRAFPGVAEYYRRRFRHILVDEYQDTNHAQYALVREL
VGVPGEGQLDIPPAELTVVGDSDQSIYAFRGADVRNIVDFEKDYPSARTILLEQNYRSTQ
TILTAANAVISRNPNRPEKKLWTAEGDGAKIVGYVGENEHEEARFIAEEIDRLQDEENLR
PGDVAIFYRTNAQSRSLEDVLVRVGLPYKVVGGTRFYERKEIKDALAYLRVLANQDDVVN
LRRILNEPKRGIGDRAEYSVAALAERERISFMEALRRAEEAPGLATRSLNSVNGFVKLID
DLAEVASGSGASAALEAVLEQTGYLAQLRSSADPQDESRVENLAELVAVVREFERDNPEG
TLSEFLEQVSLVADADQIPDAPEGSAEEVAAAVEESRRQGVVTLMTLHTAKGLEFPVVFL
TGMEQGIFPHQRSATDPAELAEERRLAYVGLTRARERLYVTRSEVRSMWGQSQYNPASQF
LGEVPPELIEWKREGMERPAWGGGGSITSSRYSGSHWGAGAPSSMGGGTGGNISAAPVAK
AMGRVQPQKEVISVVVGDNVNHTSFGHGTVLSVEGTGDKTVAKVKFDVGEKRLLLRYAPL
TKEG
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggactatctctttgatccgtacttctccacgcccggcaagtccaagaccgcccctggg
gccgccaaggaggacaccgcccacggcggcggcgccgccgttcccgaagccgtcacgcct
gaaccgccggcccacggcggccacggcaccacccacgctgggcggtctccgcgcgtcgac
gatgcgcgggcagcggacctgctgcgcggcctgaacccgcagcaggaggaagcggtcaag
cacgccggttcgccgctgctgatcgtggccggcgccggctccggcaagacccgggtactc
agccaccgcattgcctacctgatggcgaccggccggtccaaccccggacagatcctggcc
atcacgttcaccaacaaggccgccgcagagatgcgcgaacgcatcgagtccctggtgggc
ggcgtcgcgaaaaccatgtggatctccaccttccactcctcctgcgtgcggaccctgcgc
cgcgaggcaaaagccgtggggatgaactccaacttctccatctacgactccgcggacact
ctgcggctgatcaccctggtggcgaaggggctggacctggatcccaagcggtttgcgccc
aaggccatcgcgaacaagatctccggactcaagaatgaactgatcgatgacgagtcctac
gcctcgagcgccaactactcggatcccttcgaacaggcagtcgcccaggtctacaccggc
tacacccagcgcatgcgccaggccaacgccatggacttcgacgacctcattgcccagacc
gtctatatgttccgggccttccccggcgtagctgagtattaccggcgccgcttccgccac
atcctggtcgacgagtaccaggacaccaaccatgcccagtacgccctggtgcgcgaactc
gttggcgtgccgggggaggggcagctggatattccgccggccgaactcaccgtggtgggc
gattccgatcagtccatctatgccttccgcggcgcggacgtgcgcaacattgtggatttc
gagaaggactacccctccgcccgtaccatcctgctggagcagaactaccgctccacccag
accatcctcaccgccgccaacgcggtgatctcccgcaacccgaaccggccggagaaaaag
ctctggaccgcggagggcgacggcgccaagattgttggctacgtcggtgagaatgaacac
gaagaagccaggttcatcgcggaggagatcgaccggctgcaggacgaggagaacctgcgt
ccgggcgacgttgccatcttctaccgcaccaatgcccagtcccgttcgctcgaagatgtg
ctggtgcgggtaggcctgccgtacaaggttgtcggcggcacccggttctacgaacgcaag
gaaatcaaggacgcgctggcctacctgcgggtgctggcgaaccaggacgacgtcgtgaac
ctgcgccgcatcctcaacgaacccaagcgcgggatcggcgaccgcgccgagtactccgtg
gccgccctcgctgaacgcgagcggatcagctttatggaagcgctgcgccgggccgaagaa
gcgcccggcctggccacccgctcgctgaactccgtcaacggcttcgtcaagctgatcgac
gacctcgctgaagtagcatccggctccggtgcctccgcggccctggaagccgtgctggaa
caaaccggctacctcgcccagctgcgctccagcgccgatccgcaggacgagtcccgggtg
gaaaatctcgcggaactcgtcgccgtggtccgggaatttgaacgcgacaaccccgaagga
accctgtccgaattcctggaacaggtgtccctggtggccgatgccgaccagattccggac
gccccggaaggatccgcggaggaggtcgccgctgcggtggaagagtcccggcgccagggc
gttgtcaccctgatgacgctgcataccgccaaggggctggagttcccggtggtgttcctg
accggcatggagcagggcatcttcccgcaccagcgctccgccaccgacccggccgagctg
gccgaggaacgccgcctggcgtacgtcgggctcacccgggcccgcgaacggctctacgtg
acccgctcggaagtgcgcagcatgtgggggcagagccagtacaacccggccagccagttc
ctgggcgaggttcccccggagctgatcgagtggaagcgcgaaggcatggaacggccggcc
tggggcggcggaggcagtatcacctccagccgttacagcggttcgcactggggtgccggg
gcgccgtcctccatgggaggcggtaccggcggcaacatttcagccgcaccggtggctaag
gcaatgggccgtgtgcagccgcagaaggaagttatctccgtggtggtgggggataatgtc
aaccacacttcgttcggccacggcactgtgctctcggtggaaggaaccggggataaaacg
gtggcgaaggtgaagttcgacgtcggcgaaaagcgcctgctgctgcgctatgcgccgctc
accaaggaagggtga
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