Arthrobacter sp. Helios: ArtHe_10890
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Entry
ArtHe_10890 CDS
T11003
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
artl Arthrobacter sp. Helios
Pathway
artl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
artl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ArtHe_10890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
artl03019
]
ArtHe_10890
03009 Ribosome biogenesis [BR:
artl03009
]
ArtHe_10890
Enzymes [BR:
artl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ArtHe_10890
Messenger RNA biogenesis [BR:
artl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ArtHe_10890
Ribosome biogenesis [BR:
artl03009
]
Prokaryotic type
rRNA helicases
ArtHe_10890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
CMS1
HEM4
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
UPO78862
LinkDB
All DBs
Position
complement(2415466..2417349)
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AA seq
627 aa
AA seq
DB search
MVEAPVEAEEANEVLFTDFNLDARVLAALTDVGYKTPSPIQAATIPVLLEGRDVVGLAQT
GTGKTAAFAVPALSRMAELAEVNGPTKDTQILVLAPTRELALQVAEAFTSYAAHMDDFTV
LPVYGGSPYGPQLNGLRRGAQVVVGTPGRVIDHISKGSLDLSNLQYLVLDEADEMLRMGF
AEDVEQILSSTPDEKQVALFSATMPGAIRKIAKKYLNNPAEITVKSKTTTGVNTRQRYVQ
VMGPHKLDAMSRILETEDFDGVIAFVRTKMATEDLADKLKSRGYKAAAINGDIPQQQRER
TVEALRDGKIDILVATDVAARGLDVERISHVFNYDIPHDTESYVHRIGRTGRAGRSGDAI
LFMTPREKYLLRAIEKATRQPVEHMQLPGIDVVNAKRLAKFSDRITETMKSEDLSVFREL
VTKYIAENDVPAEEVAAALVVMAQAGRPLLMEEIPQAPARQRERSEGRNDGFGSRGPTRA
LTEGNATYRIAVGRRQRVMPGSIVGAIANEGGLSSAQIGGIDIRADHTLVELPADLSKDQ
LRALSRTRIGGELIHLELDNGRRPAREGGSSDRADRGYKKDFKKRDGERSFGDRGSDRPY
KKKFDGDRSFSKPAGAGAGARKPRFRD
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
attgtagaagcgcccgttgaagctgaagaagccaacgaggttctgttcaccgattttaac
cttgacgcccgcgttctggctgccctgaccgacgtcggctacaagacgccgtcgcccatc
caggcagccaccatcccggttctgctcgaaggccgcgacgtcgtcggcctggcccagacc
ggtaccggcaagaccgcagcgttcgctgttcccgccctctcccgcatggctgaactggcc
gaggtcaacggacccaccaaggacacccagatcctggtcctggccccgacccgcgagctg
gccctgcaggtagccgaggctttcacctcctacgccgcgcacatggatgacttcaccgtc
cttcccgtctacggcggatccccctacggcccccagctgaacggcctgcgccgtggcgcc
caggttgttgttggaaccccgggccgcgtgatcgaccacatctccaagggttccctggac
ctgtccaacctgcagtacctggtcctggacgaggccgacgaaatgctgcgcatgggcttc
gccgaagacgtggagcagatcctctccagcaccccggatgagaagcaggttgccctcttc
tccgccacgatgccgggcgcgatccgcaagatcgccaagaagtacctgaacaaccccgcc
gaaatcacggtcaagtccaagaccaccaccggcgtcaacacccgccagcgctacgtgcag
gtcatgggcccgcacaagctcgatgccatgtcccgcatcctcgagaccgaggacttcgac
ggcgttatcgcgttcgtccgcaccaagatggccaccgaggacctcgccgacaagctgaag
tcccgcggctacaaggctgccgccatcaacggggacatcccgcagcagcagcgtgagcgc
actgtcgaggccctgcgcgacggcaagatcgacatcctggtcgccaccgacgtcgccgcc
cgcggcttggacgtcgagcgcatcagccacgtcttcaactacgacatcccgcacgacacc
gagtcctacgtgcaccgcatcggccgcaccggccgtgcaggccgcagcggtgacgcgatc
ctgttcatgaccccgcgcgagaagtacctgctgcgcgccatcgagaaggctacccgccag
cccgttgagcacatgcagctgcccggcattgacgttgtcaacgccaagcgcctggcgaag
ttctccgaccgcatcacggagaccatgaagtccgaagacctctccgtcttccgcgaactg
gtcaccaagtacattgccgagaacgacgttcccgccgaggaagtcgccgcagccctggtt
gttatggcccaggccggccgcccgctgctgatggaagaaattccgcaggctccggcccgc
cagcgcgagcgttccgaaggccgcaacgacggcttcggctcccgcggcccgacgcgcgcc
ctgaccgaaggcaacgcaacgtaccgcatcgccgtcggccgccgccagcgcgtgatgccc
ggctccatcgtcggcgccatcgccaacgagggaggcctgtcctccgcccagatcggcggc
atcgacatccgtgccgaccacaccctggtggaactgcccgcagatctgtccaaggaccag
ctgcgcgccctgtcccgcacccggatcggcggcgagctgatccacctggaactggataac
ggacgccgtccggcccgtgaaggcggctcgagcgaccgcgctgaccgcggttacaagaag
gacttcaagaagcgcgacggcgagcggtccttcggtgaccgtggctccgaccgcccgtac
aagaagaagttcgacggcgaccgcagcttcagcaagcccgcaggtgccggtgccggtgcc
cgcaagccgcgcttccgcgactaa
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