Arthrobacter sp. Helios: ArtHe_11670
Help
Entry
ArtHe_11670 CDS
T11003
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
artl Arthrobacter sp. Helios
Brite
KEGG Orthology (KO) [BR:
artl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
artl03032
]
ArtHe_11670 (topA)
03400 DNA repair and recombination proteins [BR:
artl03400
]
ArtHe_11670 (topA)
Enzymes [BR:
artl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ArtHe_11670 (topA)
DNA replication proteins [BR:
artl03032
]
Prokaryotic type
DNA Topoisomerases
ArtHe_11670 (topA)
DNA repair and recombination proteins [BR:
artl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ArtHe_11670 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UPO76012
LinkDB
All DBs
Position
complement(2577517..2580234)
Genome browser
AA seq
905 aa
AA seq
DB search
MPVKATDKSAGKKKKLVIVESPAKGKTIAGYLGEGFEVTASMGHIRDLPQPSDLPAELKK
SSLGKFAVDVEKDFEPYYVVSADKKKKVAELKAALKDADELYLATDGDREGEAIAWHLLQ
VLKPKVPVHRLTFPEITKEAIQRALLEMRDIDISMVDAQETRRILDRLYGYEISPVLWRK
VARGLSAGRVQSVATRLVVERERERMAFRSASYWDLLGTFATASSETFKARLTSVDGARI
ATGKDFTDRGELKSKSVTHLDEAAAVSLAAGLESASFSVRSLETKPYTRRPAAPFTTSTL
QQEASRKLRFSSRVTMQVAQRLYENGYITYMRTDSSSLSDQAINAARRQASELYGPEYVP
EARRVYKGKSKNAQEAHEAIRPAGDSFRTPAQVASSLRGDEFKLYELIWKRTVASQMADA
KGSTASVKLGAVSADGRDAEFSASGTVITFRGFMAAYEEGHDASREDEEGAGDSRLPILK
KDDPLKAAELAAAGHETSPPPRFTEASLVKMLEELGIGRPSTYAATISTIMDRGYVTSRG
QALVPSWIAFSVVRLLEEHFTDYVDYDFTAELEEDLDRIARGEAGRVEWLNRFYYGDRVE
TGLHTIVNDLGEIDARAVNSIEIADGIVLRVGKFGPYLERPLPADAPEGTEPDRANVPED
LAPDELTAEKAIELMNSAGPEERVLGEDPETGRTIVARNGRYGPYVIELIPEPTAEELAN
QPVEYYKNGKPKPPKKPVKVKPRTGSLFKSMSVETVTLEEALKLMRLPRVLGTDAEGNEI
TVQNGRFGPYLKKGTDSRSIGSEEEIFTITLEQALEIYSQPKQRGGRQAAAPLAEFGTDP
VSEKPIVVKDGRFGPYITDGITNITVPRSTAIEELTREQAVELLAEKREKGPAKKPVRKR
ATAKK
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
gtgccagttaaggcaacggacaagtcggccggcaaaaagaagaagttggtaattgtcgag
tccccggccaagggcaagaccatcgccgggtacctcggcgaggggttcgaagtgaccgcc
tccatggggcatatccgcgaccttccccagccctcggaccttcctgcggagctgaagaag
agctcgctgggcaagttcgccgtcgacgttgagaaggactttgagccgtattacgtcgtc
tccgccgacaagaagaagaaggtcgccgagctcaaggccgcgctcaaagacgccgacgaa
ctttacctcgcaactgacggtgaccgcgaaggcgaagccatcgcgtggcacctgcttcag
gtcctgaagccgaaggtacccgtccaccgcctgaccttccccgaaatcaccaaggaagcc
atccagcgcgcgctgctggaaatgcgggacatcgacatctccatggtcgacgcgcaggaa
acccgccgcatcctggaccgcctgtacggctatgagatctccccggtgctctggcgcaag
gtcgcccggggactgtccgccggccgcgtccagtccgttgccacccgtctggtggtggaa
cgcgaacgcgaacgcatggccttccgctccgcgtcctactgggacctgctgggcaccttc
gccaccgcctcctcggagaccttcaaagcccgcctgacctcggtcgacggcgcccggatc
gccaccggcaaggacttcaccgaccgcggtgagctcaagtccaagagcgtcacccacctg
gacgaggcagccgccgtatcgctggccgccggcctggaatcggcgtcgttctcagtccgt
tcgctggagaccaagccctacacccgccgtccggcagcgccgttcaccacctccacgctg
cagcaggaagccagccgcaagctgcgtttctcctcccgtgtgaccatgcaggtggcgcag
cggctgtatgaaaacggctacatcacttatatgcgtaccgactcctcctcgctgtcggac
caggccatcaacgctgcacgccgccaggcttcggagctttacgggcccgaatacgtgccc
gaggcccgccgcgtatacaagggcaaatccaagaatgcgcaggaagcccacgaggccatc
cgccccgcgggtgactccttccgcaccccggcacaggttgcgtcctcgctgcgcggcgac
gagttcaagctctacgaactgatctggaagcgcaccgtcgcctcccagatggcagatgcc
aagggctcgacggcgtccgtcaagctgggtgccgtgtccgcggacgggcgcgacgccgag
ttctcggcctccggaacggttatcaccttccgcggtttcatggctgcgtatgaagagggc
catgacgcttcccgggaagacgaggaaggcgccggcgacagccgcctgccgatcctgaag
aaggacgatccgctgaaggcagcggaactcgctgccgccggccacgagacctcgccgccg
ccgcgcttcactgaagcctcgctggtcaagatgctcgaagagctcggcatcggccggccg
tccacctatgcggcgaccatctccaccatcatggaccgcggttacgtgaccagccgcggc
caggccctggtcccgagctggatcgccttctccgtggtgcgcctgctcgaagagcatttc
accgactacgtggactacgacttcacggccgaactcgaagaagatctggaccggatcgcc
cgcggcgaagccggccgggtggaatggctgaaccggttctactacggcgaccgcgtcgag
accggcctccacaccatcgttaacgatctgggcgagatcgacgcccgcgcggtgaactcg
attgagatcgccgacggcattgtgctgcgcgtgggcaagttcggcccgtatttggaacgc
ccgctgcccgcggacgctcccgaaggcaccgagccggaccgtgccaacgtgcccgaggac
ctggcaccggatgagctgaccgccgaaaaggcgatcgaactcatgaacagtgccggcccc
gaggaacgtgtgctcggcgaggacccggaaaccgggcgcaccatcgtggcccgcaacggc
cgctacggtccctacgtcatcgaactgatccccgagcccacggccgaggaactggccaac
cagccggtggagtactacaagaacgggaagcccaagcccccgaagaagccggtcaaagtc
aagccgcgcaccggttcgctcttcaagtccatgagcgtggagacggtcaccctggaggag
gccctgaagctgatgcgcctgccgcgcgtgctgggcaccgacgctgagggcaacgagatc
accgtgcagaacggccggtttggtccgtacctgaaaaagggcacggactcccgctcgatc
ggctcggaggaggagatcttcacgatcaccctggagcaggcgctggagatctactcgcag
cccaagcagcgcggcggacgccaggccgctgctccgctggcggagttcggcaccgacccc
gtgtcggagaagcccattgtggtgaaggacggacgcttcggcccgtacatcaccgacggc
atcacgaacatcacggttcctcgctccaccgcgatcgaggaactcacgcgggaacaggcc
gtggaactgctggccgagaagcgcgagaaggggccggccaagaagcctgtccgtaagcgc
gctacggcgaagaagtag
DBGET
integrated database retrieval system
