Arthrobacter sp. MN05-02: MN0502_23930
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Entry
MN0502_23930 CDS
T10188
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
artm Arthrobacter sp. MN05-02
Pathway
artm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
artm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MN0502_23930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
artm03019
]
MN0502_23930
Messenger RNA biogenesis [BR:
artm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MN0502_23930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
DUF459
Motif
Other DBs
NCBI-ProteinID:
BBE23510
LinkDB
All DBs
Position
2533747..2535783
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AA seq
678 aa
AA seq
DB search
MNKRPAALKAPRELAKGAMRIVALGGIGEIGRNMTVFEFDGKLLIVDCGVLFPEEHQPGV
NVILPDFSYIRDRLDDVVAVVLTHGHEDHIGAVPYLLKERADIPLVGSRLTLAFIEAKLK
EHRITPKTVQVKEGERRTMGGFDLEFVAVNHSIPDSLAVAIRTAAGMVLHTGDFKMDQFP
LDRRITDLGAFARLGDEGVDLFLTDSTNADVPGFTTSEKDLAPAIDAVFRTAPRRIIVSS
FASHIHRIQQIIDTAHQHRRKVAFVGRSMVRNMTIAADLGYLNIPQGLLVDFKKLERSDD
HKVVLICTGSQGEPMAALSRMANKDHAIRISEGDTVLLASSLIPGNENAIYGIINALTEI
GANVVHKGNAKVHVSGHASAGELAYCYNIVKPRNVMPVHGEWRHLRANSEIAVATGVDPR
NVVIAQDGVTVDLVRGRATLSGKVEAGLVFVDGDSVGGITERRTSASAAGWPRRVSSRSS
RSSIPTTATSSRHRSSSPRGSPAPTRTSTRRAPPSRRRCGIPPPIARVAAARTRRTSSSG
PRRTGCAGTTTASPWSRRSSSTPDPSSTPKAPVPASTGAFVVRKPDSARQRPAARTSPLI
TCVRWACPILPAGPGRWAGTPVDAEAPRPQQTAAPRLGGTGVLLVERDGLSEPRRPSASG
RDPRPRTPRACRPRGSPW
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagagacctgccgcactgaaagcaccacgggaactggccaagggagccatgcgc
atcgtcgctctcggtggcatcggtgagatcggcagaaacatgaccgtcttcgagttcgac
ggcaagctgctgatcgtggactgcggtgtcctgttccccgaggagcaccagcccggcgtg
aacgtcatcctccccgatttctcctacatccgggaccggctcgacgacgtcgtcgccgtc
gtgctcacgcacgggcacgaggaccacatcggcgccgtcccgtacctcctgaaggaacgc
gcggacatccccctggtcggctcgcggctcacgctcgccttcatcgaggcgaagctcaag
gagcaccgcattacgccgaagaccgtgcaggtcaaggagggtgaacgtcggaccatgggc
ggcttcgacctcgaattcgtcgccgtgaaccactccatcccggacagcctcgccgtcgcc
atccgcacggcggccggcatggtgctgcacaccggcgacttcaagatggaccagttcccc
ctggaccgccgcatcacggatctgggcgccttcgcacgcctgggcgatgagggcgtggac
ctgttcctcaccgactccaccaacgcggacgtccccgggttcacgacctcggagaaggat
ctcgcaccggcgatcgacgcggtcttccgcaccgcgccgcgccgcatcatcgtctcgagc
ttcgccagccacatccatcgcatccagcagatcatcgacaccgcgcaccagcaccgccgc
aaggtggcgttcgtgggccgctcgatggtgcgcaacatgaccatcgcggcggacctcggc
tacctcaacatcccgcagggcctgctcgtggacttcaagaagctcgagcgcagcgacgac
cacaaggtggtcctcatctgcaccggctcccagggggagccgatggcggccctgtcgcgc
atggccaacaaggaccacgccatccgcatcagcgagggtgacacggtgctgctggccagc
tccctcatcccgggcaacgagaacgccatctacggcatcatcaatgcgctgaccgagatc
ggcgccaacgtggtgcacaagggcaacgccaaggtgcacgtctccggccatgccagcgcc
ggcgagctcgcgtactgctacaacatcgtcaagccgcgcaacgtcatgccggtgcacggc
gaatggcgccacctgcgggcgaactcggagatcgccgtcgccaccggcgtcgacccccgc
aacgtcgtcatcgcccaggacggcgtgacggtcgacctcgtgcgcggccgcgcgacgctc
tcgggcaaggtggaggccggtctcgtgttcgtcgacggcgacagcgtcggcgggatcacc
gagaggaggacctccgcgagcgccgccggctggccgaggagggtgtcgtcacggtcctcg
cgatcatcgatcccgacaacggcgacatcgtcgaggcaccggagttcttcaccaaggggt
tctcctgctccgacgaggacctcgacaaggcgggcgccgccgtcgagaaggcgctgcggg
attccgccgccaatcgccagggtggccgccgccaggacccggaggacatcatcgagcggg
ccacggcgaactggatgcgccggtactacaaccgccagcccgtggtctcggcgatcgtcg
tcgacgcctgatcccagcagcaccccgaaggccccggtacccgcgagtaccggggccttc
gtcgtccggaaacccgacagcgcccgacagcgtcctgccgcgcgaaccagcccactgatc
acctgcgtccggtgggcatgtccgatccttcccgctggaccgggccggtgggcgggcacc
cccgtcgacgccgaggcgccacggccgcaacagacagcagcaccccggctcggaggaacc
ggggtgctgctggtggaacgggacgggctctcggagccccggcgtcctagtgcgagtggc
cgtgaccctcgtcctcggactcctcgggcttgtcgaccacgagggtctccgtggtga
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