Arthrobacter sp. MN05-02: MN0502_25980
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Entry
MN0502_25980 CDS
T10188
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
artm Arthrobacter sp. MN05-02
Brite
KEGG Orthology (KO) [BR:
artm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
artm03016
]
MN0502_25980
Enzymes [BR:
artm01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MN0502_25980
Transfer RNA biogenesis [BR:
artm03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MN0502_25980
Prokaryotic type
tRNA splicing ligases
MN0502_25980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
BBE23715
LinkDB
All DBs
Position
2730405..2731574
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AA seq
389 aa
AA seq
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MQWITEKYVNFASIIDDATLAQNRRTSSMPFVYPHFASMPDAHLGLGCAVGSVLPTLGAI
IPAAVGVDIGCGMVAVRTNYSAGDIAGLDRRRLRESIEWAVPLSAGNNNKRVSASAQPRI
DALDEDARRAGFDPAGYVKNWRLQLGTLGSGNHFIEVSLDEADDVWLFLHSGSRGIGNRI
AQRHIRAAQDYCAGRSISLPHQDLAYLEEGTPEFDRYIGELLWAQKFALLNREEMMDRVV
GQFTHWVGKPVQELERINCHHNYTHRESHFGKDVWLSRKGAIAADPGRPGLIPGSMGTRS
YVVTGRGNREAMDSAPHGAGREYSRNAARRTFTQDQLRAAMQGIEFRDTPAFLDEIPAAY
KDIDIVMQDARDLVDIRHTLRQIINVKGD
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcagtggatcacggagaagtacgtcaacttcgccagcatcatcgacgacgcgacgctc
gcacagaaccgcaggacgagttccatgccgttcgtgtacccccacttcgcctccatgccc
gacgcccatctgggcctcggctgcgctgtcggttcggtcctgccgaccctcggcgcgatc
atcccggcggcggtcggggtggacatcggctgcgggatggtcgccgtgcgcacgaactac
tcggcaggagacatcgcgggtctggaccggcggaggctgcgcgagtcgatcgaatgggcc
gtacccctctccgcgggcaacaacaacaagcgggtgtccgcctccgcccagccgcgcatc
gacgccctcgacgaggacgcccggcgcgccgggttcgaccctgccggctacgtcaagaac
tggcggctgcagctgggtaccctcggctccggcaaccacttcatcgaggtgtcgctcgac
gaggcggacgacgtctggctgttcctgcactcgggctcgcgcggtatcgggaaccgcatc
gcgcagcgccatatccgagcggcgcaggactactgtgcgggtcggtccatctcgctgccg
catcaggatctcgcctacctcgaggagggaacgcccgagttcgaccgctacatcggcgaa
ctgctgtgggcgcagaagttcgccctgctcaaccgcgaggagatgatggaccgcgtggtc
ggccagttcacgcactgggtcggcaagcccgtgcaggagctcgaacgcatcaactgccac
cacaactacacgcaccgggagagccacttcgggaaggacgtctggctctcccgcaagggt
gccatcgcggcggatccagggcgcccaggcctcatcccgggctcgatgggtacgcgctcc
tacgtggtgacgggcaggggcaacagggaggcgatggattcggcgccccacggagcggga
cgggagtactcccgcaacgccgcgcggaggaccttcacgcaggaccagctccgagccgcg
atgcagggcatcgaattccgggacacccctgcattcctcgacgagatcccggccgcctac
aaggacatcgatatcgtcatgcaggacgcccgggacctcgtggacatccggcataccctg
cggcagatcatcaacgtgaagggcgactga
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