Arthrobacter sp. NyZ413: ABCW42_01000
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Entry
ABCW42_01000 CDS
T11382
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
artn Arthrobacter sp. NyZ413
Pathway
artn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
artn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
ABCW42_01000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
artn03400
]
ABCW42_01000
DNA repair and recombination proteins [BR:
artn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
ABCW42_01000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
XQZ28565
LinkDB
All DBs
Position
207356..208252
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AA seq
298 aa
AA seq
DB search
MRAIWKGSIAFGLVNVPVKLYSATEDHDVSLHQVHNKDGGRIRYQRKCEICSAVVDYEDI
DKAYEEEGRTVVLSAEDLKSLPAESSREIEVVEFVPAEQLDPIMYEKPYYLEPDSKSPKA
YMLLLRTLQDTERVAIVQYALRQKTRLGALRVRGDVLMLQSLLWDDEVREANFPSLETDV
KISDKELEMSSALVDSMARDFEPEEYTDNYQVQLRQLIAAKFEKGDSIDTEETFGVTAGE
GEGGEVIDLMEALKRSLEKKRGKSSGSSSGDADEEPDAGAGAGAGRGAGRPRARAKKA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagggccatatggaagggttctatcgcgttcgggctggtcaacgtcccggtcaagctt
tacagcgcaaccgaggaccacgatgtcagtctccaccaagtgcataacaaggatggaggc
cgcattcgttaccaacgcaaatgcgaaatctgctccgctgttgtggattacgaggatatc
gacaaggcctacgaagaggaaggccgcaccgtggtgctctccgcggaggacttgaagtcc
ctcccggccgagagcagccgcgaaatagaggtggtggagttcgtcccggccgagcaactg
gaccccatcatgtacgagaagccgtactaccttgagccggactccaagtcgcccaaggcc
tacatgctgctcctgcggaccctccaggacaccgaacgcgtggctatagtgcagtacgcc
ctccggcaaaagacccgccttggcgccctgcgggtgcgcggcgatgtgctgatgctgcaa
tcgttgctgtgggatgacgaggtccgcgaagccaacttcccttccctcgagaccgacgtc
aagatttcggacaaggagcttgaaatgtcctcggccctggtggattccatggcccgcgac
tttgagcccgaggaatacaccgacaactaccaggtccaacttcgccaactcatcgcggcc
aagttcgaaaagggtgactccatcgacaccgaggagaccttcggggtcaccgcgggcgaa
ggagagggcggcgaagtcatcgacctcatggaggccctcaagcgaagccttgaaaagaag
cggggcaagtcgtccggttcttcgtccggggacgccgatgaagagcccgacgccggtgct
ggtgcgggtgccggccgaggggcggggaggccgagggcgcgggccaagaaagcctga
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