Arthrobacter sp. NyZ413: ABCW42_04695
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Entry
ABCW42_04695 CDS
T11382
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
artn Arthrobacter sp. NyZ413
Pathway
artn03420
Nucleotide excision repair
artn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
artn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABCW42_04695 (pcrA)
03430 Mismatch repair
ABCW42_04695 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
artn03400
]
ABCW42_04695 (pcrA)
Enzymes [BR:
artn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABCW42_04695 (pcrA)
DNA repair and recombination proteins [BR:
artn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABCW42_04695 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
ABCW42_04695 (pcrA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XQZ29239
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Position
968654..971293
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AA seq
879 aa
AA seq
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MDMLFDPYADGPFKAGSRAATKDAPAMLSRSGGGLPGFERGMPDAGHRLAEGPSSEGPGS
EGHNSEGHSQPAHSVPGSELPGAPVREAHGSPHQGQAGLPSREALLQGLNPQQEEAVKHA
GSPLLIVAGAGSGKTRVLSNRIAYLIATGRAHHGEILAITFTNKAAAEMRERIEALVGNR
AKSMWISTFHSSCVRILRREAANVGLNSNFSIYDSTDSLRLITLVAKNLELDPKRFAPKA
IQHKISALKNELIDDDAFASTANYNEPFEQAVAEVFKGYTQRLRQANAMDFDDLIAQTVY
MFRAFPALAESYRRRFRHVLVDEYQDTNHAQYALVREIVGEGPQASELTVVGDSDQSIYA
FRGADIRNIVEFEKDYPEARTIKLEQNYRSTQNILSAANSVISRNPNRPDKKLWTAEGDG
EKIIGYVGENEHDEAQFIAKEIDRLQDEDGLRPGDVAIFYRTNAQSRSIEDVLVRVGLPY
KVVGGTRFYERKEIKDALAYLRVLVNPDDDVNLRRVLNEPKRGIGDRAEGAVAALAERER
TSFMAAARKAEQAPGMATRSVNAVLGFVKLLDDLAEVATGSGAAAALEAVLEQTGYLAGL
RASTDPQDESRVENLAELVAVVREYERDNPEGSLGEFLEQVSLVADADQIPDAPEGSSAD
AAAAVAEAKRMGVVTLMTLHTAKGLEFPVVFLTGMEHGLFPHQRSATDPKELAEERRLAY
VGLTRARKRLYVTRSEVRSMWGQSQYNPASQFLEEIPGELVDWKREGTSRQVSGWGGASI
GSNRYGGSFWGAGTARGTGASPTAGFDADVPAAVVRNRVQPQKEIVAVSVGDKVNHTSFG
NGTVIGVEGSGDKTVAKVRFDVGEKRLLLRYAPLTKLDS
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggatatgttgtttgacccgtacgcggatggccctttcaaagccggcagcagggctgcc
accaaggacgctcctgccatgctttcgcgctccggcgggggtctgccgggcttcgagaga
gggatgcccgacgccggtcaccgccttgcggaaggacccagctccgaaggacccggctcg
gaaggacacaactccgagggacacagccagccggcacatagcgtgccgggcagcgagctt
ccgggtgccccagtccgtgaggcccacggttcaccgcaccaaggccaagccggtttgccg
tcgcgcgaggccctgctgcagggattgaacccgcaacaagaggaagccgtcaagcatgcc
ggcagtccgctgttgatcgtcgcgggcgcaggatcgggaaagacgcgtgtgctgtccaac
cgcatcgcctacctgattgccacaggacgcgcgcatcacggtgagatcctcgccatcacg
ttcaccaacaaggcagccgcggaaatgcgggaacgcatcgaggccttggtggggaaccgg
gcgaagtccatgtggatttccacgttccactcttcgtgcgtgcggatcctgcgccgtgaa
gccgctaatgtcgggctgaactccaacttctcaatctacgattccacggactcgcttcgt
ctcatcacgctcgttgccaagaacctggagctcgatcccaagcgcttcgcgcccaaggcc
atccagcacaagatttcggccctcaagaacgagctcatcgacgatgacgctttcgcttcc
acggcaaattacaacgaacccttcgaacaggccgtggccgaggttttcaagggctatacg
caacgcctccgccaggcgaacgccatggacttcgacgacctcatcgcccagacggtctac
atgttccgggccttccctgcgctcgcggagtcctaccggcgccgtttccggcacgtcctc
gtggacgaataccaggacaccaaccacgcccagtacgcgctggtgcgtgaaatcgtcggc
gagggtccgcaagcgagcgagctgaccgtcgtcggcgactcagaccagtccatctacgct
ttccgcggcgcggacatccgcaacatcgtcgaattcgagaaggactacccggaagcccgg
accatcaagctggagcagaattaccgctccacgcagaacatcctgagcgccgccaactcg
gtcatttcacgcaacccgaaccggccggacaagaagctctggacggcggaaggcgacggc
gaaaagatcatcggctacgtcggggagaacgaacacgacgaagcccagttcattgccaag
gaaatcgaccggctgcaggatgaggacggcttgcgcccgggcgacgtcgcgattttctac
cggacgaacgcgcaatcccgttcgattgaagacgtcctggtgcgcgtcggcctgccctac
aaagtggtgggtggcacccgcttctacgagcgcaaggaaatcaaggacgccctcgcgtac
cttcgcgtcttggttaacccggacgacgacgtcaacttgcgccgcgtgctcaacgagccc
aagcgggggatcggcgatcgcgcggaaggcgctgtggcggccctcgccgaacgcgaacgg
acgtcgttcatggcggccgcccgcaaagccgagcaggctcccgggatggccacgcgttct
gtcaacgccgtcctgggcttcgtcaagctgttggacgacctcgcggaagtggctaccggc
tctggcgcggcagctgcgcttgaagccgtcctcgaacagacggggtaccttgcggggctt
cgagccagtaccgatccccaggacgaatcgcgcgtggaaaacctggcggaactcgttgcc
gtggtccgcgaatacgagcgcgacaaccccgaaggttcgctgggagagttcctcgaacag
gtatcgctcgtggctgacgccgaccagatcccggacgctcccgaaggatcgtccgcggac
gccgccgcggctgtggccgaggccaagcggatgggcgtggtcaccctgatgacgctccac
acggccaaaggcctggaattcccggtggtcttcctgaccggtatggagcacgggctcttt
ccgcaccagcgctccgcgaccgaccccaaggaactggcggaagaacggcgcctcgcctac
gtgggcctgacgcgcgcacggaagcgcttgtacgtgacccgctccgaggtccgcagcatg
tggggccaaagccagtacaaccccgcgagccagttcctcgaagagattccaggcgaactc
gttgattggaagcgcgaaggaacgtcccggcaggtgagtggctggggcggcgcgtccatt
ggttccaaccgctacggcggctcgttctggggagccggaaccgcgaggggaaccggggcg
agccccaccgccgggttcgacgccgacgtgccggccgccgtcgtacgcaaccgcgtccag
ccgcaaaaggaaatcgtcgcggtttcggtgggggacaaggtgaaccacaccagcttcggc
aacgggaccgtgatcggcgtcgaaggctccggggacaagaccgtggcgaaggtgaggttc
gacgtcggggagaagcgcctgctgctgcgttacgcgccgctgaccaagctggattcctag
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