Arthrobacter sp. NyZ413: ABCW42_09640
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Entry
ABCW42_09640 CDS
T11382
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
artn Arthrobacter sp. NyZ413
Brite
KEGG Orthology (KO) [BR:
artn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
artn03012
]
ABCW42_09640 (selB)
Translation factors [BR:
artn03012
]
Eukaryotic type
Elongation factors
ABCW42_09640 (selB)
Prokaryotic type
ABCW42_09640 (selB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
WHD_3rd_SelB
Beta-barrel_SelB
MMR_HSR1
GTP_EFTU_D2
eIF2_C
FeoB_N
SRPRB
Motif
Other DBs
NCBI-ProteinID:
XQZ30156
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Position
2062651..2064447
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AA seq
598 aa
AA seq
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MHVVATAGHVDSGKSTLVRALTGMEPDRWEEERRRGLTIDLGYAWTRLPSGQDVAFVDVP
GHERFLGNMLAGIGPAPVVCFVVAADEGWQAQSSDHRDAVAALGIEHGVVVLSRADRASR
ERIGEVLARTRAELAGTGLHDAPAVTVSAVDGTGLADLRAALDGVLAGVPSPTTSGRVRL
WVDRSFTITGSGTVVTGTLAAGTIAQGDRLQMLGHLDSRPVVVRGLQSCDSSYPSVGPVS
RVALNLRDISATDIRRGDALVTPDAWPTTGVIGIRRTTGVSYTEAPEQLMVHVGTASVPA
RLRAFDADHARLVLDRHLPLVLGDRLVLRDPGSRLVLGGARILDGDPPALRRRGDGAHWA
ERLTGMDPAGDVLGEVAARGAVQEQHLRRLGLLSGHDGEIPAGVRALGEWWVHDPVLEAW
QQKLNRAVRALQERDSLAPGLSMGAARDLLALPDERLLAHVIRGAGLEQDGGHVRLPGSQ
GDLGAVEPAIAELERRLAAHAFHAPESDQLAALGLGARELAAAERAGRVLRLRDGVVLLP
SAPAFAMRALARLEQPFTTSEARQALDTTRRVAVPLLEHLDSRGWTRRLDAGHRTVVR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgtcgtcgccaccgccggacacgtcgattccggcaagagcaccttggttcgcgcc
ctgaccggaatggagccggaccgctgggaggaagaacggcgccgcgggctcaccatcgac
ctcgggtatgcgtggaccaggttgccgtccggacaggatgttgccttcgtggacgtgccc
gggcatgagcgatttctcggcaacatgcttgccggaatcggaccggcacccgtggtctgc
ttcgtcgtcgccgcagacgagggctggcaagcgcagtcgagcgaccaccgggacgcggtt
gccgcgctcggaattgaacacggcgtcgtcgtcctgagccgcgccgaccgcgcgtcccgg
gaacggatcggcgaggtgctcgcaaggacccgtgctgagctggccgggaccggcctgcat
gatgcgccggcggtcaccgtgtccgccgtcgacggcaccggcctggctgacttgcgtgca
gcgctcgacggcgtcctggccggcgtgccttctcccacgacttccggacgggtccggttg
tgggtggaccgctcattcaccatcacgggttccgggaccgtcgtgaccgggacactggcc
gccgggacgatcgcccaaggcgaccggctgcagatgctcggacaccttgactcccggccc
gtcgtggtccgtggcctgcaaagctgcgacagttcttacccctcggtggggcccgtcagc
cgggtggcgttgaacctgcgcgacatttccgcgacggatatccgccgcggcgacgcgctg
gtgacacccgatgcttggcctacaaccggagtcatcggtatccggcggaccaccggtgtg
tcctacaccgaagcgccggagcaactcatggtgcacgtcgggaccgcgtcggtacccgcg
cggctgcgtgcctttgatgccgaccacgccaggctcgtccttgacaggcacttgccgctg
gtactcggcgaccgcctggtgctgcgtgacccgggaagccgcctggtgctgggcggcgct
cgcatcctcgacggcgacccgcccgccctccgacggcgcggcgacggcgcccactgggcg
gagaggctcacaggcatggatccggcaggggacgtgctcggagaagtagcggcccgcggg
gcggtgcaggaacaacatctgcggcggctcgggctgctgtccgggcacgacggcgaaatc
cccgccggtgtccgggccctaggggagtggtgggtacatgaccctgtcctcgaggcgtgg
cagcaaaagctgaaccgcgcagttcgggcgctgcaggagcgcgactctttggccccgggc
ctttccatgggtgcggccagggacctgctcgcgttgcccgatgagaggttgcttgcccac
gtcatccgcggtgcgggactggaacaggacggcggccacgtccggttgccaggcagtcaa
ggcgaccttggcgccgtcgaaccggcaatcgccgagctggaacgcaggcttgccgcacat
gcgttccatgccccggagtccgatcagctggccgccttgggcctcggcgcccgggaactc
gctgccgccgaacgcgcggggcgcgtgttgcggctgcgggacggagtggtgctgctgcct
tcggccccggcttttgccatgcgtgccctcgctcgcctggagcagcctttcaccacaagc
gaggcacgacaggcgttagacacgacacggcgggtcgcggttccactgctcgaacatctc
gactcccgcggctggacccgtcgattggatgccgggcaccggacggtggtgcggtga
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