Arthrobacter sp. NyZ413: ABCW42_11975
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Entry
ABCW42_11975 CDS
T11382
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
artn Arthrobacter sp. NyZ413
Pathway
artn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
artn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABCW42_11975 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
artn03400
]
ABCW42_11975 (uvrA)
DNA repair and recombination proteins [BR:
artn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABCW42_11975 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABCW42_11975 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
RsgA_GTPase
AAA_16
nSTAND1
AAA_22
APS_kinase
AAA_25
nSTAND3
NACHT
DnaJ_CXXCXGXG
PRK
Viral_helicase1
cobW
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
XQZ26774
LinkDB
All DBs
Position
complement(2556986..2559913)
Genome browser
AA seq
975 aa
AA seq
DB search
MPKAVAEEPAVESLTSISAQELDLPVRHDLSRLVVKGAREHNLRNVDLDLPRDAMIVFTG
LSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQVDKPDVDFIEGLSPAVSIDQKSTS
KNPRSTVGTITEIYDYMRLLWARVGRPHCPVCHEPITRQTPQQIVDQLLELEAGTRFQVL
APVVRGRKGEFVDLFKELSAKGYSRARVDGDLVQLTDPPKLGKQFKHSIEVVVDRLVVKE
GISQRLTDSIETALGLAEGRVLVEFVDFDAEDPARIRAFSENLACPNEHPLAIDEIEPRS
FSFNNPFGACAACSGIGTKLEVDEELVVPNPELSLNEGAIAPWSLGTATTEYWNRLLDGL
AFELGFSMDTPWEKLPKDVRNTVLHGKDHKVVVQYRNRFGRERKYSTGFEGAIQYVHRKH
GETDSDWARDRYEEYMRQIPCPACNGARLNPASLSVLINGKSIAEVSALPMRECAAFLGG
LTLTEREAQIAHQVLKEIQARLTFLLDVGLEYLNLERPSGTLSGGEAQRIRLATQIGSGL
VGVLYVLDEPSIGLHQKDNRRLIETLTRLRDLGNTLIVVEHDEDTIHEADWVVDIGPGAG
EHGGQVVHSGSYKALLENKDSLTGDYLSGRRKIDVPAKRRKYDKKRELKVVGARENNLNN
VDATFPLGLFTAVTGVSGSGKSTLVNEILYKVLANKLNGAKQVAGRHKSVMGLEHLDKVV
HVDQSPIGRTPRSNPATYTGVFDNIRKLFAETTEAKVRGYQPGRFSFNVKGGRCEACSGD
GTLKIEMNFLPDVYVPCEVCHGARYNRETLEVHYKGKTIADVLNMPIEEAAGFFAAFTPI
ARHLNTLVDVGLGYVRLGQPATTLSGGEAQRVKLASELQKRSNGRSVYVLDEPTTGLHFE
DIRKLLLVLQGLVDKGNTVITIEHNLDVIKSADWIVDLGPNGGSGGGRIVATGTPEQVAK
SSESHTATFLAEILG
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
gtgcctaaagccgtagctgaagaaccagccgtcgaatccctcacaagcatctccgcacag
gagcttgacctgcccgtgcggcacgatctgtcgcgcctcgtcgtcaagggagcccgcgaa
cacaacctcaggaatgtcgatctcgaccttcccagggacgccatgatcgttttcaccgga
ctttccgggtccgggaagtcgtccctggcattcgacaccatttttgccgagggccagcgc
cgttacgtggaatcattgtcggcctatgcccgccagttcctcggccaggtggacaagccc
gacgtcgatttcatcgagggtctttccccggccgtctccatcgaccagaagtccaccagc
aagaatccccggtccacggtgggcaccatcaccgagatctacgattacatgcgcctcctg
tgggcccgcgtcggcaggccgcactgcccggtgtgccatgagcccatcacccggcagaca
ccgcagcagatcgtcgaccaattgctggaactcgaggccggcacccggttccaggtcctc
gccccggtggtgcggggacgcaaaggcgaattcgttgatctcttcaaggagctcagcgcg
aagggctactcccgggcgcgcgtggatggcgacctcgtccaattgaccgatccgcccaag
ctcggcaagcaattcaagcactccatcgaagtggtggtggaccggctggtggtcaaggag
gggatcagccagcgcctcaccgactccatcgagacggctctcggcctcgccgagggccgg
gtcctggtcgaattcgtggacttcgacgcggaagatcccgcccggatccgtgcgttctcc
gagaaccttgcttgcccgaacgaacaccccttggccatcgacgagatcgaaccccgctcg
ttctccttcaacaacccgttcggcgcttgcgcagcctgcagtggcatcggcaccaagctt
gaggttgacgaggaactcgtcgtccccaacccggagctttccttgaacgaaggcgccatc
gcgccgtggtcgttgggtacagccaccacggagtactggaacaggctgttggacgggctc
gctttcgagcttggcttctcgatggacacgccatgggagaagctgccgaaggatgtccgg
aatacggtgctgcacggcaaggaccacaaagtggtggtccaataccgcaaccgctttggg
cgcgagcgcaagtacagcaccggattcgaaggcgccatccagtatgtccaccggaagcac
ggcgaaacggactccgactgggcccgcgaccgctacgaagaatacatgcggcagattcct
tgccccgcctgcaacggtgcccggctcaacccggcgtcgctgtcggtactgatcaacggg
aagtccatcgcggaggtttcggccctgcccatgcgtgaatgcgccgcgttcctcggtggc
ctcacgctcaccgaacgtgaggcgcagatcgcccaccaggtgctcaaggagatccaggcc
cggctcacgttcttgctcgacgtcggtcttgaatacctcaacctggagcgcccgtccgga
actttgtccggtggtgaagcccagcgcatccgcctggcgacgcagatcggttccgggctg
gtaggtgtgctgtacgtgcttgacgaaccgtccatcggtttgcaccagaaggacaaccgc
cggctcatcgaaacgctcacccgccttcgtgacctcggaaataccctgatcgtcgtcgaa
cacgacgaggacactatccacgaggccgactgggtggtggacatcggacccggtgccggt
gaacacggtggccaagtggtccattccggttcctacaaggcattgttggagaacaaggat
tcgctcacgggcgactacttgtccggccggcggaagatcgacgttccggcgaagcgccgc
aagtacgacaagaagcgcgagctgaaggtcgtcggtgcccgcgagaacaacctgaacaat
gtcgacgcgaccttcccgcttggcctcttcacggctgtcaccggcgtgagtggctcggga
aagtccaccttggtgaacgagatcctgtacaaggtgctcgccaacaagctcaatggtgcc
aagcaggtggccggacggcataagtccgtgatggggcttgagcacctcgacaaggtggtc
catgtggaccagagtcccatcggacggactccgcgttccaacccggccacgtacacaggc
gtgttcgacaacatccgtaagctctttgccgagaccactgaagcaaaagtccgcggctac
caacctggccggttctccttcaacgtcaagggcggacgctgcgaggcctgctccggcgac
ggtacgttgaagatcgagatgaacttcctgccggatgtgtacgttccgtgcgaagtgtgc
cacggtgcgcgctacaaccgggaaaccctcgaggtccactacaaaggcaagaccatcgcc
gacgtccttaacatgcccattgaagaggcagcggggttctttgcggcgttcacgccgatc
gcccggcacttgaacaccctggtggacgtcggcttgggctacgttcggctgggacagccc
gccaccacgctgtcaggcggtgaggcgcagcgggtgaaacttgcttcggaattgcagaaa
cgctcgaacggccgcagcgtctacgtcctggacgaacccaccacaggtttgcatttcgag
gacatccggaagctgctcctggtcctgcagggactggtggacaagggaaatacagtgatc
accatcgagcacaacctcgatgtcatcaagtccgccgactggatcgtggacctcggtccc
aacggcggttccggcggtggccggatcgtggcaaccggcacgcccgaacaagtggcaaag
tcttcggagagccataccgccacgttcctcgcggaaattctgggctag
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