Arthrobacter sp. NyZ413: ABCW42_13485
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Entry
ABCW42_13485 CDS
T11382
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
artn Arthrobacter sp. NyZ413
Pathway
artn03030
DNA replication
artn03430
Mismatch repair
artn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
artn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABCW42_13485
03430 Mismatch repair
ABCW42_13485
03440 Homologous recombination
ABCW42_13485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
artn03032
]
ABCW42_13485
03400 DNA repair and recombination proteins [BR:
artn03400
]
ABCW42_13485
Enzymes [BR:
artn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABCW42_13485
DNA replication proteins [BR:
artn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABCW42_13485
DNA repair and recombination proteins [BR:
artn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABCW42_13485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Motif
Other DBs
NCBI-ProteinID:
XQZ27043
LinkDB
All DBs
Position
complement(2898615..2899616)
Genome browser
AA seq
333 aa
AA seq
DB search
MALDFTAIDFETANGFRGSPCSVGLTKVRGGVVVEEASWLMRPPENHDHFDFHNTRIHGI
RAEDVADAPRFAEVFPEIGAFIGEDILAAHNAAFDLGVIRSGLEVSGLPGPAYEYVCTVM
LSRRCYSLVSNSLPYAAEEAGVPLVNHHDATEDARACAGILVDIARRNNANSIAELYLSL
GLSLPVQPAFRPGEALSKQTLAALAAVGTRRAQPSAAGNGRSWSSWPEEGLNPEPNPAAE
PSHPLFGQTVVFTGELGIARPDAKQRAAEMGARPESRVTGRTTVLVVGDGFVAGDLRTGR
LTGKAKRVLELHSRGQQIEVLSEGEFLQMVGGS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
gtggcattggactttacggcgatcgacttcgaaactgcgaatggcttcaggggctcgccg
tgttcggtcgggttgaccaaggtccgtggcggagtggtggtggaagaagcctcctggctc
atgaggcctccggagaaccatgaccacttcgacttccacaacacccggatccatggcatc
agggccgaggacgtcgcggatgccccgcgtttcgccgaggttttcccggaaatcggtgcg
tttatcggggaagacatcctggcggcccacaacgccgcattcgacctcggcgtcatccgt
tccggcctggaagtgtccggactacccggcccggcatacgagtacgtctgtaccgtgatg
ctgtccaggcgctgctactccctggtgtccaattccttgccttacgccgccgaagaggca
ggcgtgccgctggtgaaccaccacgatgccacggaggacgcaagggcgtgcgccggtatc
ctggtggacatcgcgcgccgcaacaatgccaacagcatcgccgaactctatttgtcgctt
ggcttgtccttgccggtgcagccggcattccgtcccggcgaagcgttgtcgaagcaaacg
ctcgccgcgctcgcagccgtcgggacccgccgcgctcagccgtccgccgcgggaaacggc
cgaagctggagcagttggcccgaagaaggtttgaatccggagcccaaccccgccgcggag
ccgagccacccgttgttcggccagacagtggtgttcacgggcgagctcggcattgcccgg
ccagatgcgaaacaacgggcggcggagatgggcgcgcggcccgaaagccgcgtgacggga
aggacgacagtcctggtggtgggcgatggtttcgtggcgggtgatcttcgcacgggccgc
cttacgggcaaggccaagcgggtcctcgaactccatagccgcgggcagcagatcgaagtg
ctgtccgagggcgaattcctccagatggtcggcggaagctag
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