Arthrobacter sp. PAMC25564: E5206_05710
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Entry
E5206_05710 CDS
T06052
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
artp
Arthrobacter sp. PAMC25564
Brite
KEGG Orthology (KO) [BR:
artp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
artp03032
]
E5206_05710 (topA)
03400 DNA repair and recombination proteins [BR:
artp03400
]
E5206_05710 (topA)
Enzymes [BR:
artp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
E5206_05710 (topA)
DNA replication proteins [BR:
artp03032
]
Prokaryotic type
DNA Topoisomerases
E5206_05710 (topA)
DNA repair and recombination proteins [BR:
artp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E5206_05710 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
GldM_4th
MacB_PCD
Motif
Other DBs
NCBI-ProteinID:
QCB96483
UniProt:
A0A4P7SU71
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All DBs
Position
1256562..1259300
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AA seq
912 aa
AA seq
DB search
MPSKAKTGKKLVIVESPAKSKTIAKYLGEGFIVEASIGHIRDLPQPSELPAELKKSSVGK
FAVDIDNDFKPYYVVSADKKKKVAELKAQLKDADALYLATDGDREGEAIAWHLLEVLKPK
VPVYRMTFGEITKEAIHRAMDNLRDVDQDLVDAQETRRVLDRLYGYEISPVLWRKVARGL
SAGRVQSVVTRMVVDRERERMAFKAASYWDLTGQFGAGTASFKAKLAAVDGAKVASGRDF
NDNGELTSRNVVHVNEELATALAAGLQDADFRVRSVDTKPYTRRPAAPFTTSTLQQEAGR
KLRFTSKSTMQVAQRLYENGYITYMRTDSSALSNEAVTAARRQASELYGPEYVPASPRVY
TGKAANAQEAHEAIRPAGDSFRTPAQVAKQLSGDEFRLYELIWKRTVASQMADAKGSTAT
IRLGAVAAGGAADGRDAEFSASGTVITFPGFLAAYEEGKDESRGDDESEEARRLPNVAKD
DALTASEIVAVGHETSPPPRFTEASLTAELEKKGIGRPSTYASTISTIQDRGYVRKQGSA
LVPSWIAFSVVRLLEQHFKDYVDYEFTADMEADLDKIANGQAAGPAWLKHFYFGGDSEPG
LLSIVNNLGEIDAREINSIPITEGITLRVGKFGPYLESSVPTVDPKTGELVESARANVPE
DLAPDELTAAKAVELMETAAPEERVLGADPHTGHTVVAKNGRYGAYVTEVIPEMTEEQLA
NQPVEYYKNGKPKPPKKPVKAKPRTGSLFASMSVETITLDEALQLMSLPRVLGQDAEGNP
ITVQNGRFGPYLKKGTDSRSIGSEEEIFTITLEAALEIYSQPKQRGARAAVPPLAEFGPD
PVSEKNIVVKEGRFGPYITDGITNITVPRSTALEELTREQAVELLAEKRARGPVKRTTTA
RKAPVRKAAAKK
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
gtgccaagcaaggccaaaaccggcaagaaactcgtgatcgtagagtctcccgccaagagc
aagaccatcgccaagtacctcggcgagggcttcatcgtcgaggcctccatcggtcacatc
cgcgacctgccgcagccctcggagctccccgcggaactgaagaagtcctcggtcggcaag
ttcgccgtcgacatcgacaacgacttcaagccctattacgtggtgtccgcggacaagaag
aagaaggtcgccgagctcaaggcccagctcaaggatgctgacgctctttacctcgcaacc
gatggggaccgcgagggcgaggccatcgcgtggcacctgctggaggtcctcaagcccaag
gtcccggtctaccggatgaccttcggcgaaatcaccaaggaagccatccaccgcgccatg
gacaacctgcgcgatgtggaccaggacctcgtcgacgcgcaggaaacccgccgcgtgctg
gaccggctctatggctacgagatttccccggtgctctggcgcaaggtggcacgcggcctg
tccgccggccgcgtccagtccgtcgtgacccgcatggtggtcgaccgcgagcgtgagcgc
atggcgttcaaggccgcctcctactgggacctcacgggccagttcggcgccggcactgct
tccttcaaagccaagctcgcggccgtcgacggcgccaaggtggccagcggccgcgacttc
aatgacaacggcgagctcacctcacgcaatgttgtgcacgtcaacgaggaactcgccact
gcactggcggcagggctgcaggacgccgatttccgcgtccgctcggttgacaccaagccg
tacacccgccgcccggcagcaccgttcacgacctccacgctgcagcaggaggcaggccgc
aagctgcgcttcacctccaagagcacgatgcaggtggcccagcggctctacgaaaacggc
tacatcacctatatgcgtacggactcctccgcgctgagcaacgaagccgtgacggccgcg
cgccgccaggcctccgagctgtacggccccgagtacgtcccggcgtcgccgcgggtttac
accggcaaggcggccaacgcgcaggaagcccacgaggccatccgccccgccggtgactcc
ttccgcaccccggcccaggtggccaagcagctctccggcgacgaattccggctctacgag
ctgatctggaagcggaccgtcgcctcgcagatggccgatgccaagggatccaccgccacc
atccgcctcggcgccgtggccgcaggcggggcggccgatggccgggacgccgaattctcg
gcctccggcaccgtcatcaccttccccggcttcctcgccgcctacgaagaaggcaaggac
gagagccggggcgacgacgagtccgaggaagcacgccggctcccgaacgtcgccaaggac
gacgcgctgaccgcctcggagatcgtcgccgtcgggcacgagacctccccgccgccgcgc
ttcaccgaagcctcgctgaccgcggaactcgaaaagaagggcatcggccgcccgtcgacc
tacgcctccaccatctccacgatccaggaccgcggctacgtccggaagcagggctccgcg
ctggtccccagctggatcgcgttctccgtggtccggctgctcgagcagcacttcaaggac
tacgtggactatgagttcacggccgacatggaagcggacctggacaagatcgccaacggc
caggctgccggacccgcctggctcaagcacttctacttcggcggggattccgagcccggc
ctgctgagcatcgtcaacaaccttggcgagatcgacgcccgagaaatcaactcgattccc
atcaccgagggcatcacgctgcgcgtcggcaaattcgggccgtacctggaaagctccgtc
ccgacggtggatcccaagaccggcgagctcgttgaatccgcccgcgccaacgttcccgag
gacctggccccggacgagctcaccgcggccaaggcggtcgagctgatggaaaccgcggcc
cccgaggagcgtgtgctcggcgccgatccgcacaccgggcacacggtcgtcgccaagaac
ggccgctatggcgcctatgtcaccgaggtcatccccgagatgaccgaggaacagctcgcc
aaccagccggtcgagtactacaagaacggcaagcccaagccgccgaaaaaaccagtcaaa
gccaagccgcggaccgggtccctgttcgcctcgatgagcgtggagaccatcaccctggac
gaagcgctgcagctgatgagcctgccccgggtcctcggccaggacgctgaaggcaacccc
atcacggtacagaacggccggttcggcccgtacctgaagaagggcacggattcccggtcc
atcggctcggaagaggaaatcttcaccatcacgctggaggcggcgctggagatctactcc
cagcccaagcagcgcggggcccgggcagcggtgccgccgctggccgagttcggtccggac
ccggtctcggagaagaacatcgtggtgaaggaaggccgcttcggcccgtacatcaccgac
ggcatcaccaacatcaccgtgccccgcagcaccgccctggaggagctgacccgcgaacag
gccgtcgaactcctcgccgagaagcgcgcgaggggcccggtcaagcgcaccacgacggcc
cgcaaggccccggtccgcaaagccgccgccaagaagtag
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