Arthrobacter sp. PAMC25564: E5206_06740
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Entry
E5206_06740 CDS
T06052
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
artp
Arthrobacter sp. PAMC25564
Pathway
artp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
artp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E5206_06740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
artp03019
]
E5206_06740
03009 Ribosome biogenesis [BR:
artp03009
]
E5206_06740
Enzymes [BR:
artp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E5206_06740
Messenger RNA biogenesis [BR:
artp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E5206_06740
Ribosome biogenesis [BR:
artp03009
]
Prokaryotic type
rRNA helicases
E5206_06740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
HEM4
UvrA_inter
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QCB96664
UniProt:
A0A4P7STW3
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All DBs
Position
1481175..1483322
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AA seq
715 aa
AA seq
DB search
MPENQNNSVETETVQIDVETSETAAPAAESTTEAPVSTEAPAAAEAAPLNEAPLNDTKSA
DPKAAPSKDEDAEEEGIKFVDLGIDARVLAALQDVGYEKPSPIQAATIPLLLEGRDVVGL
AQTGTGKTAAFAVPALSRLAELHDLNGPSRKTQALVLAPTRELALQVAEAFTSYAKHIDD
FTVLPVYGGSAYGPQLAGLRRGAQVVVGTPGRVIDHIAKGSLDLSELQYLVLDEADEMLR
MGFAEDVEQIFQQTPEGRQVALFSATMPSQIRRLSKQYLNNPAEVQVKSKTTTGANTRQR
YLQVMGPHKLDALTRILEVEEFEGVIAFVRTKMATEDLADKLRSRGFQAAAINGDIPQQQ
RERTVEALRDGKIDILVATDVAARGLDVERVSHVVNYDIPHDTESYVHRIGRTGRAGRSG
DAILFMTPREKYLLRSIEKATRQPVEQMHLPTAETVNTLRLGKFAEKITETLESEDVAAF
RDLIASYEEEHNVPAAEIAAALAVMAQGGQPLLVKELPAAPEFQKRERAKDGFGSRGPTR
TLTEGNATYRIAVGRRQRVMPGSIVGAIANEGGISSAQIGGIDIRADHSLVELPADLSAD
QLKALSRTRIGGELIHLELDNGRKPSGERGSYQGGSRGGDRGGFSGGGDRGGNFKGNGGF
KREFRKNDGDRGGFAGGGERSSADRGGRSFSERGVSSDAARKPRTEGGFKPRTKW
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaaatcagaacaactccgtcgaaaccgaaaccgtccagatcgacgtcgagact
tctgaaacggctgcccccgcagccgaatccaccaccgaagcaccggtatccaccgaggct
ccggccgctgccgaggcagcccccctgaacgaagcccccctgaacgacacgaagtccgcc
gaccccaaggcagccccgtccaaggacgaggacgccgaggaagagggcatcaagttcgtt
gacctcggcattgacgcccgcgtcctcgccgccctgcaggacgtcggctacgagaagccg
tccccgatccaggcagcaaccatcccgttgctgctcgaaggccgcgacgtcgtgggcctg
gcccagacgggtaccggtaagactgcagcattcgcagtaccggcactctcccgcctggcc
gaactccacgacctcaacgggccgtcccgcaagacccaggcgctggtgctcgctccgacc
cgcgagctcgcactccaggttgccgaggccttcacctcctacgccaagcacatcgatgac
ttcaccgtcctgccggtgtacggcggctcggcctacggcccccagctggccggcctgcgc
cgcggcgcccaggttgttgtcggtaccccgggacgcgtgatcgaccacatcgccaagggc
tcactcgatctgtccgaactccagtacctggtgctggacgaggctgacgagatgctgcgc
atgggcttcgccgaagacgtggagcagatcttccagcagacccccgagggccgccaggtt
gcactgttctccgccacgatgccgagccagatccgccgcctgtccaagcagtacctgaac
aacccggccgaggtccaggtcaagtccaagaccaccacgggcgccaacacccgccagcgc
tacctgcaggtcatgggcccgcacaagcttgacgcgctgacccgcatccttgaggtcgag
gagttcgaaggcgtcatcgcgttcgtgcggaccaagatggctaccgaggatctcgccgac
aagctgcgctcccgcggcttccaggccgccgccatcaacggcgacatcccgcagcagcag
cgtgagcgcacggtcgaggccctgcgcgacggcaagatcgacatcctcgtcgccaccgac
gtcgcggcccgaggccttgacgtggagcgtgtcagccacgtggtcaactacgacatcccg
cacgacaccgagtcctacgtccaccgcatcggccgcaccggccgtgcaggccgttccggc
gacgcgatcctgttcatgacgccgcgggagaagtacctgctgcgttccatcgagaaggca
acccgccagccggtggagcagatgcacctgccgacggccgagaccgtcaacacgctgcgc
ctgggcaagttcgccgagaagatcaccgagacgctcgagtccgaggatgtcgcggccttc
cgtgacctcatcgcctcctacgaggaagagcacaacgttccggccgccgagatcgctgcc
gcactggccgttatggcgcagggcggacagccgctcctggtcaaggaactgcctgctgct
cctgaattccagaagcgcgaacgcgccaaggacggcttcggctcacgcggcccgacccgc
accctgaccgagggcaacgccacctaccggatcgccgtcggacgccgtcagcgcgtcatg
ccgggttccatcgtcggcgccatcgccaacgagggcggcatctcttcggcccagatcggc
ggcatcgacatccgcgcggaccactccctggtggaactccccgcggacctcagcgccgat
cagctcaaggccctgtcccgcacccggatcggcggcgagctgatccacctcgagctggac
aacggccgcaagccctccggtgaacgtggcagctaccagggcggcagccgtggtggcgac
cgtggtggcttctccggcggcggggaccgcggtggcaacttcaagggcaacggcggcttc
aagcgcgaattccgcaagaacgacggcgaccgcggcggtttcgccggcggcggcgagcgt
tcctcggcggaccgtggcggacgctccttcagcgaacgcggcgtgtcctcggacgcggca
cgcaagccccgcaccgaaggcggcttcaagccccggaccaagtggtaa
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