Arthrobacter sp. PAMC25564: E5206_12545
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Entry
E5206_12545 CDS
T06052
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
artp
Arthrobacter sp. PAMC25564
Brite
KEGG Orthology (KO) [BR:
artp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
artp03019
]
E5206_12545
Enzymes [BR:
artp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
E5206_12545
Messenger RNA biogenesis [BR:
artp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
E5206_12545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
AAA_22
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QCB97645
LinkDB
All DBs
Position
complement(2686989..2689877)
Genome browser
AA seq
962 aa
AA seq
DB search
MSSIPGPESPSERYRASAERAAEAKTYLGGFIRSLEFELDDFQREACLSLQAGRGVLVAA
PTGAGKTIVGEFAIYLALQRGLKAFYTTPIKALSNQKYSELAEKYGAAQVGLLTGDTSIN
GDASVVVMTTEVLRNMLYADSDTLDDLGFVVMDEVHYLADRFRGAVWEEVIIHLPSEVQV
ASLSATVSNAEEFGAWLDTVRGQTDVIVSEHRPVPLWQHVMVGRKIVDLFAGDTSFDEIA
PAGEAGAPGTTAATDVGTRPGFEVNPELLSMARAESQMNFRGRFGRGGRNQRRQPHQRGD
EAQQGGPRSPVRKASRPQVIASLDRQDLLPAITFIFSRAGCDAAVAQCVSAGLWLTTEKE
QLIIARRVDEAAQDIPSDDLDVLGFWSWRDGLLRGLAAHHAGMLPTFKEVVEKLFADGLV
KAVFATETLALGVNMPARCVVLEKLEKFNGEAHVNITAGEYTQLTGRAGRRGIDVEGHAV
VLWQPGTDPAAVAGLASRRTYPLNSSFRPTYNMSINLLAQFGRPRAREILESSFAQFQAD
RSVVGLAKQVRSREESLAGFSKSMTCHLGDFTEYSRLRRALSDAEKNASKGSSRARKSLT
EDSLSRLLPGDVVDVPTGRAPGLAVVLSSDHHSREPRPAVMTLDNQLRRIGTQDVEGPLS
PITRIRIPKSFNAKVPKSRRDLASSVRNAIRDNRPPAPPARDEDFGRAAALPDQEKKIAE
LGRQLRAHPCHGCSEREDHARWSERWWKLRQETDGLVRQIQGRTNTIAKTFDRVCGVLTG
YGYLETSESGVLSISTDGQRLRRIYGEKDLLISQALRMGAFDDLDAAEIAALASVLVYQA
KREDRGLRPKMPSVSLESAVDTVVHEWSALEDVEEAAKLPLTGEPELGLVWPIFKWAKGK
HLQDVLNGTDLAAGDFVRWVKQVIDLLDQLAKIPGLDPRVTRLCGEAIRLVKRGVVAYSS
VA
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaatacccgggccggagtcgccgtccgaacgctaccgcgccagcgccgagcgg
gccgcagaagccaaaacgtacctgggcgggttcatccgttcgctcgaattcgaactcgat
gacttccagcgcgaggcgtgtttgtcccttcaggccggacgcggggtgctggtcgcagcc
cctaccggggccggcaagacgatcgtgggggagttcgccatctatctggccctgcagcgc
ggactcaaggccttctacaccaccccaatcaaggcactgagcaaccagaagtactccgag
ctggccgagaagtacggtgcagcccaggtgggcctgctgaccggtgacaccagcatcaac
ggggacgcatccgtggtcgtgatgaccaccgaggtgctccgcaacatgctgtacgcggac
tcggacaccctcgacgacctgggctttgtggtgatggacgaggtccattacctcgcagac
cgcttccgcggcgccgtctgggaagaggtgatcatccacctgcccagtgaggtgcaggtg
gcatccctgagcgccaccgtctcgaacgccgaggagttcggcgcctggctggacaccgtc
cgcggacagaccgatgtgatcgtctccgaacaccgcccggtaccgctctggcagcacgtc
atggtgggccggaagatcgtggatctcttcgccggcgacaccagcttcgacgagatcgcc
ccggccggcgaggccggcgctcccggaaccacggcagccacagacgtcggcacgcggccc
ggcttcgaggtcaacccggagctgctgtccatggcgcgggccgagagccagatgaatttc
cgcggccgcttcggacgcggcgggcgcaaccagcggcggcagccgcatcagaggggcgac
gaggcccagcagggcggcccgcggagccccgtccggaaggccagccgcccccaggtcatc
gccagcctggaccggcaggatctcctgccggcgatcacgttcatcttctcccgcgccggc
tgtgacgccgccgtcgcccagtgcgtctcggcggggctgtggctgaccacggagaaggaa
cagctcatcatcgcccggcgcgtcgatgaggccgcccaggacatcccctccgacgatctg
gacgtcctcgggttctggagctggcgggacggcctgctccgcggactcgccgcccaccac
gccggtatgctgcccaccttcaaggaagtcgtcgagaagctcttcgccgacgggctggtc
aaggccgtctttgccaccgaaaccctggccctcggcgtcaacatgccggcccgctgcgtc
gtgctggagaagctggagaagttcaacggcgaggcgcacgtgaacatcacggcgggggag
tacacccagctgacgggccgggccggacgccgcgggatcgacgtcgagggccatgcggtg
gtgctctggcagccgggcacggaccctgccgccgtcgccggcctcgcctcgcggcgcacc
tacccgctgaactcgagcttccggccgacctacaacatgtccatcaacctgctggcccag
ttcggccggccgcgcgcccgcgagatcctcgaatcctccttcgcccagttccaggcggac
cgctccgtcgtcggcctggccaagcaggtccggagccgggaagaatccctggccggcttc
agcaagtcgatgacctgccacctcggcgacttcaccgagtattcccggctgcggcgcgcc
ctctccgatgccgagaagaacgcctccaaaggcagctcccgggcacggaagtcgctcacc
gaggattccctgagccgcctgctcccgggcgatgtggtggacgtgcccaccggcagggca
cccgggctcgccgtcgtgctgagctcggaccaccactcgcgcgaaccgcgccccgccgtc
atgaccctggacaaccagctgcggaggatcgggacccaggatgtggagggcccgctctct
cccatcacccggatccggatcccgaagtccttcaacgccaaggtacccaaatcccgccgc
gatctggcctcgtcggtgcgcaacgcgatccgggacaaccgcccgcccgcaccgcccgcc
cgggacgaggatttcggccgcgccgccgccctgccggaccaggagaagaagatcgcggaa
ctgggccggcagcttcgcgcccacccgtgccatggctgcagcgaacgcgaggaccacgcc
cggtggtccgagcgctggtggaagctccgccaggaaaccgacgggctggtgcgccagatc
cagggcaggacgaacaccatcgccaagacgttcgaccgggtctgcggggtgctgaccggc
tacggttacctggagacctcggaatccggcgtcctgtccatcagcacggacgggcagcgg
ctccgccggatctacggggagaaggacctgctcatttcccaggccctgcggatgggtgcc
ttcgacgacctcgacgccgccgaaatcgcggccctcgcgagtgtcctggtctaccaggcc
aaacgggaggaccgcggcttgcggcccaagatgcccagcgtttcgctggagtccgccgtc
gacaccgtggtgcatgagtggtccgcgctcgaggacgtggaggaagccgccaaactgccg
ctcaccggcgagcccgagcttggcctggtctggccgatcttcaaatgggccaagggcaag
cacctccaggatgtcctcaacggcaccgatctcgccgcaggcgactttgtccgctgggtg
aagcaggttattgatctcctggaccagctggccaagatcccgggccttgacccgcgcgtc
acacggctgtgcggggaagccatccggctcgtcaagcgcggcgttgtcgcctattcatcg
gtggcatga
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