Arthrobacter sp. PAMC25564: E5206_15525
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Entry
E5206_15525 CDS
T06052
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
artp
Arthrobacter sp. PAMC25564
Pathway
artp03030
DNA replication
artp03430
Mismatch repair
artp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
artp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E5206_15525 (dnaE)
03430 Mismatch repair
E5206_15525 (dnaE)
03440 Homologous recombination
E5206_15525 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
artp03032
]
E5206_15525 (dnaE)
03400 DNA repair and recombination proteins [BR:
artp03400
]
E5206_15525 (dnaE)
Enzymes [BR:
artp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E5206_15525 (dnaE)
DNA replication proteins [BR:
artp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E5206_15525 (dnaE)
DNA repair and recombination proteins [BR:
artp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E5206_15525 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QCB98149
LinkDB
All DBs
Position
complement(3325023..3328553)
Genome browser
AA seq
1176 aa
AA seq
DB search
MTSSNNSFVHLHNHTEYSMLDGAARLGDLFNHTKELGMSSLATTDHGFVFGAFDFWNKAR
NAGVKPIVGVEAYLTPGTARADKTRVRWGDGGRNDVSGAGSYTHMTMWAETTQGMHNLFR
MSSLASLEGYLYKPRMDRDLLQTYGKGLIATTGCPSGEVQTKLRLGLYQEAKQAASDFRD
IFGAENFFCELMDHGLDIERTIQADLIKLAKELGLPMVATNDLHYTHAEDAASHAALLCV
QSGSSLADPKRFKFDADEFYLKSPAEMRAIFSDHPDACDNTLLIAERCDVEFNENASYMP
RFPVPDGENEQSWFVKEVEKGLHYRYPKGIPDHVRKQADFEVGVITQMGFPGYFLVVADF
INWAKNNGIRVGPGRGSGAGSMVAYAMRITDLDPLVHGLIFERFLNPERVSMPDFDVDFD
DRRRAEVIRYVTEKYGDERVAMIVTYGTIKAKQALKDSSRVLGYPFSTGERLTKAMPPDV
MGKGISLADVHNPEASRYSEAEELRELLKSDADSQKVFETALGLEGLKRQWGVHAAGVIM
SSDPLIDIIPIMRREQDGQVITQFDYPTCEGLGLIKMDFLGLRNLTIITDAVENIKLNKG
IDLVLEDLDLEDQGAYELLARGDTLGVFQLDGGPMRSLLKQMRPDNFEDISAVIALYRPG
PMGANSHTNYALRKTGLQEIIPIHPELEEPLAEILGGTYGLIVYQEQVMAIAQKVAGFTL
GQADILRRAMGKKKKSELDKQYAGFEKGMMDNGYSAAAIKTLWDILLPFSDYAFNKAHSA
AYGLVSYWTAYLKAHYPAEYMAALLTSVGDDKDKLALYLNECRKMGITVLPPDVNESSVN
FTPVGKDIRFGMAAIRNVGVNVVEAMVRARESEGAFTSFKDYLLKVPAVVCNKRTIESLI
KAGAFDSLGHPRRALAMIHEEAIDSVITLKRNEAIGQFDLFAGFEDQEPEASLTTEIPDL
PEWEKKDKLSFERDMLGLYVSDHPLQGLEGLLSQHADQTITSVIGEDGPNDGAIITIAGM
ITSLSRRIAKASGNAYARAEVEDLGGSMEVMFFGQVYGPIASVLAEDLIVVVKGRLQKRD
DGAVTLNCMELSVPDLSDSMNGPVVITMQTHKATESVVTELGDVLRTHRGTSEVRLHLQG
DTRVEVMGLPVHLRVNPDPSLFGDLKVLLGPTCLDG
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
gtgacttccagcaacaactcgttcgtgcacctccacaaccacaccgaatattccatgttg
gatggtgcggcgagactgggggacctgttcaaccacaccaaggaactgggcatgtcctcg
ctggccacgacggaccatggcttcgtcttcggggctttcgacttctggaacaaggcccgc
aacgccggcgtcaaaccgattgtcggggtggaggcctacctcaccccgggcacggcgcgg
gcggacaagacccgcgtccgctggggcgacggcgggcgcaacgatgtctccggcgccggt
tcctacacccacatgaccatgtgggccgaaaccacgcagggcatgcacaacctgttccgg
atgtcctcgctggcctcgctggagggatacctctacaagccgcgcatggaccgtgacctg
ctgcagacctacggcaaaggcctgattgccactacgggctgcccgtccggcgaagtccag
accaaactccgcctcggcctctaccaggaagccaagcaggcggcgtcggacttccgcgac
atcttcggtgccgagaacttcttctgcgagctcatggaccacggcctggacatcgagcgg
accatccaggctgacctgatcaagctggccaaggagctcggcctgccgatggtggccact
aacgacctccactacacgcacgccgaagacgccgccagccatgcggcgctgctctgcgtg
cagtcgggttccagcctggccgaccccaagcgcttcaagttcgacgccgacgagttctac
ctgaagtcgccggcggagatgcgggcgatcttcagcgaccacccggatgcctgcgacaac
accctgctgatcgccgagcgctgcgacgtcgaattcaacgagaacgccagctacatgccg
cgcttcccggtgccggacggcgaaaacgagcagtcctggttcgtgaaggaagtcgaaaag
ggactgcattaccgctaccccaagggcatcccggaccacgtccgcaagcaggccgacttc
gaggtcggcgtcatcacgcagatgggcttcccgggctacttcctggtcgtggcagacttc
atcaactgggccaagaacaacggcatccgcgtcggtcccggccgtggctccggtgccggc
tcgatggtggcctacgccatgcgcatcaccgacctcgaccccctcgtccacgggctgatc
ttcgagcgcttcctgaacccggagcgcgtttccatgcccgacttcgacgtggacttcgat
gaccggcgccgtgctgaagtcatccggtacgtcaccgagaagtacggcgacgagcgagtc
gccatgatcgtcacctacggcaccatcaaggccaagcaggcgctcaaggactcctcccgt
gtgctgggctaccccttctccaccggtgagcgcctcaccaaggccatgccgccggacgtg
atgggcaagggcatctcgctggcggacgtgcacaatccggaggccagccgttactccgag
gccgaggaactgcgcgaactcctcaagtccgacgccgattcgcagaaggtcttcgagacc
gccctggggctggaaggcctgaaacgccaatggggcgtccatgccgccggcgtcatcatg
tcctcggacccgctgatcgacatcatcccgatcatgcgccgcgagcaggacggccaggtc
atcacccagttcgactaccccacctgtgagggcctcggcctgatcaagatggacttcctc
ggcctgcggaacctgacgatcatcacggacgccgtggagaatatcaagctcaacaagggc
atcgacctcgtcctggaggacctcgaccttgaggaccagggtgcctacgagctccttgcc
cggggtgacaccttgggtgtcttccagctcgacggcgggccgatgcgctccctgctcaag
cagatgcgcccggacaacttcgaggacatctccgccgtcatcgccctgtaccggcccggc
cccatgggcgcgaactcgcacacgaactacgcgctccgcaagaccggactgcaggaaatc
attccgatccaccccgagctcgaggaaccgctcgccgagatcctcggcggaacgtacggc
ctgatcgtgtaccaggagcaggtcatggcgatcgctcagaaggtcgccgggttcaccctc
ggccaggccgacatcctgcgccgcgccatgggcaagaagaagaagtccgagctggataag
caatacgccggctttgaaaagggcatgatggacaacggctattccgccgcggccatcaag
accctgtgggacatcctgctgcccttctccgactacgccttcaacaaggcgcactcggcg
gcgtacgggctggtgtcctactggaccgcgtacctcaaagcccattacccggccgagtac
atggcggccctgctgaccagcgtcggagatgacaaggacaagctggcgctgtacctcaat
gagtgccgcaagatgggcatcacggtgctgccgccggatgtcaacgagtccagcgtcaac
ttcaccccggtcggcaaggacatccgtttcggcatggccgccatccgcaatgtcggcgtc
aacgttgtcgaggccatggtcagggcccgcgagtccgagggggccttcacctcgttcaag
gactacctgctcaaggttccggccgtggtttgcaacaagcggaccatcgaatcgctgatc
aaggcgggtgccttcgactcgctgggccatccgcggcgcgccctggcgatgatccacgaa
gaggccatcgactcggtcatcacgctcaagcgcaacgaggcgatcggccagttcgacctc
ttcgccggcttcgaggaccaggagcccgaggcgtcgctgaccaccgagatcccggacctg
ccggagtgggagaagaaggacaagctctccttcgaacgggacatgcttggcctctacgtc
tccgaccaccccctgcagggcctggaggggctgctgagccagcacgcggaccagaccatc
acctcggtgatcggcgaagacgggccgaacgacggcgccatcatcaccatcgcaggcatg
atcacctcgctgagccgccggatcgccaaggccagcggcaacgcctatgcccgtgccgaa
gtcgaggaccttggcggctcgatggaagtcatgttctttgggcaggtctacggacccata
gcctcggtgcttgccgaggacctgatcgtggtggtcaagggccgcctgcagaagcgcgac
gacggcgccgtcaccttgaactgcatggaactctcggtcccggacctgagcgacagcatg
aacggccccgtggtgatcacgatgcagacgcacaaggcgaccgaatccgtggtgaccgag
ctcggagatgtgttgcggacgcaccgcggtacctcggaggtccggctgcacctgcagggg
gacacccgggtcgaggtcatggggctgccggtccatctgagggtcaacccggatccgtcc
ctgttcggtgacctgaaggtgctgctcggcccgacctgcctggacggctag
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