Arthrobacter sp. PAMC25564: E5206_16340
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Entry
E5206_16340 CDS
T06052
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
artp
Arthrobacter sp. PAMC25564
Pathway
artp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
artp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E5206_16340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
artp03019
]
E5206_16340
03016 Transfer RNA biogenesis [BR:
artp03016
]
E5206_16340
Enzymes [BR:
artp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
E5206_16340
Messenger RNA biogenesis [BR:
artp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E5206_16340
Transfer RNA biogenesis [BR:
artp03016
]
Prokaryotic type
tRNA degradation factors
E5206_16340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
RNase_PH_C
KH_PNO1_2nd
KH_2
PCB_OB
KH_KhpA-B
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
QCB98290
LinkDB
All DBs
Position
complement(3511796..3514036)
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AA seq
746 aa
AA seq
DB search
MEGPEIQFSEAVIDNGRFGKRVIRFETGRLAKQAAGAAMVYIDEETALLSATTAGKHPRE
GFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTEAILACRLMDRPLRPAFVKGLRNEVQ
IVVTVLSINPDELYDVVAINASSMSTQLSGLPFSGPIGGVRVALVADEQGSQWVAFPKYS
QLENAVFNMVVAGRVAGDDVAIMMVEAEATDNSWNLIKEQGATAPTEEVVSEGLEAAKPF
IKALCEAQADLAARAAKPTVEFPIFLDYQDDVFAAVEAAGAEKLAAVFQIADKQERDTAS
DELKDEVTSSLAGQFEGREKELSAAFRSVTKQVVRQRILKDQIRIDGRGLTDIRQLTAEV
EVLPRVHGSAIFERGETQILGVTTLNMLKMEQQIDSLSPVTRKRYMHNYNFPPYSTGETG
RVGSPKRREIGHGALAERAIMPVLPSREEFPYAIRQVSEALSSNGSTSMGSVCASTLSLL
NAGVPLKAPVAGIAMGLVSDQVDGQTRYAALTDILGAEDAFGDMDFKVAGTSEFVTAIQL
DTKLDGIPASVLAAALKQAREARLHILDVLNSAIDTPDELSEFAPRVIAVKIPVDKIGEV
IGPKGKMINQIQEDTGADISIEDDGTVYIGATNGPSADAARSAINAIANPQIPEIGERYL
GTVVKTTTFGAFVSLTPGKDGLLHISELRKIAGGKRVDNVEDVVSVGQKIQVEITKIDDR
GKLSLSPVVADEEGANAAEVSEEPAE
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcccgaaatccagttctcagaagcagtcattgacaatggccgcttcggcaag
cgtgtaatccgctttgaaaccggccgccttgccaagcaggcagccggcgcagcgatggtc
tacatcgatgaagagaccgcactgctgtccgcaaccaccgccggcaagcacccgcgtgaa
ggtttcgacttcttcccgctgaccgtcgacgtcgaagagcgtatgtacgctgcgggccgc
atcccgggctcgttcttccgccgtgaaggccgcccgtccaccgaagcgatcctggcctgc
cgcctgatggaccgcccgctgcgtccggccttcgtcaagggcctgcgcaacgaggtccag
atcgtcgtcaccgtgctgtccatcaacccggacgagctctacgacgtggtcgcgatcaac
gcgtcctcgatgtcaacccagctctccggcctgcccttctccggcccgatcggcggcgtc
cgcgttgccctcgttgccgacgagcagggttcgcagtgggttgcgttcccgaagtactcg
cagctggagaacgccgtcttcaacatggtcgttgccggccgggttgcaggagacgacgtc
gccatcatgatggttgaagccgaagccaccgacaactcctggaacctcatcaaggaacag
ggcgccaccgccccgaccgaagaggttgtctccgagggcctcgaggctgccaagccgttc
atcaaggccctgtgcgaggcccaggccgatctggcagcccgcgccgccaagccgaccgtg
gagttcccgatcttcctggactaccaggacgacgtcttcgccgccgtcgaggccgccggc
gccgagaagctggctgccgtcttccagatcgccgacaagcaggaacgcgacaccgcttcc
gacgagctcaaggacgaggtcacgagctcgctggccggccagttcgaaggccgcgagaag
gaactgtccgcggcattccgctcggtcaccaagcaggttgtgcgccagcgcatcctcaag
gaccagatccgcatcgacggccgtggcctgacggacatccgccagctcaccgccgaggtt
gaggtcctgccccgcgtccacggctcggccatcttcgaacgcggcgagacccagatcctg
ggtgtcaccacgctgaacatgctcaagatggaacagcagatcgactcgctgtctcccgtg
acgcgcaagcggtacatgcacaactacaacttcccgccgtactccaccggcgagaccggc
cgcgtcggttccccgaaacgccgcgaaatcggccatggcgccctcgcagagcgcgccatc
atgccggtgctgccgtcccgcgaggaattcccgtacgccatccgccaggtgtctgaggcg
ctcagctccaacggttcgacgtcgatgggttccgtctgtgcctccacgctgtccctgctc
aacgcaggtgtgccgctgaaggctcccgtcgccggtatcgccatgggcctggtctccgac
caggttgacggccagacccgctacgccgccctgaccgacatcctcggcgccgaagatgcc
ttcggtgacatggacttcaaggtcgccggtacctccgagttcgtcacggccatccagctg
gacaccaagctcgacggcatcccggcctccgtcctggcagccgccctgaagcaggcccgc
gaagcccgcctgcacatcctggacgtcctgaactccgcgatcgacaccccggacgagctc
tccgagttcgcgccgcgcgtcatcgcggtcaagatcccggttgacaagatcggcgaggtc
attgggccgaagggcaagatgatcaaccagatccaggaagacaccggcgccgacatctcg
atcgaggacgacggcacggtctacatcggcgccacgaacggcccgtctgccgacgcggca
cggtccgcgatcaacgccatcgccaacccgcagatcccggaaatcggcgagcgctacctg
ggcacggtcgtcaagaccacgaccttcggcgccttcgtttccctgactccgggcaaggac
ggcctgctgcacatctccgagctgcgcaagatcgccggcggcaagcgcgttgacaacgtc
gaggacgtcgtctccgtgggccagaagatccaggtggaaatcaccaagatcgatgaccgc
ggcaagctctcgctgtctcccgttgtggctgacgaggaaggcgcaaacgccgctgaggtc
tccgaggagcccgcagagtag
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