Arthrobacter sp. 7749: CGQ24_12555
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Entry
CGQ24_12555 CDS
T10551
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
artq Arthrobacter sp. 7749
Pathway
artq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
artq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGQ24_12555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
artq03021
]
CGQ24_12555
03019 Messenger RNA biogenesis [BR:
artq03019
]
CGQ24_12555
Transcription machinery [BR:
artq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CGQ24_12555
Messenger RNA biogenesis [BR:
artq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CGQ24_12555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
NACHT
Motif
Other DBs
NCBI-ProteinID:
ASN39763
LinkDB
All DBs
Position
complement(2748596..2750854)
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AA seq
752 aa
AA seq
DB search
MTETTSLTAGVEENNASKGGGLAGLKLAQLQVLASQLGITGGSRMRKNDLVSAISSHQRG
GSVADRDAAKAKAEPKVEAVAATEAAPEAKAPAKAKTAPKTGNRRSSSAAATKTETEAVA
APVAAEAKAEAPARRSRSRRADSSGTVAPATETVAAPEPAAAQAPAVEERAPRRNTRSRR
ADSNGNAPVATEAPAESAPVAVAEAPAAEATESGSQNNEARAERSERPERSERNRNRRDR
NRNRRENNNNESNDTVEAVEAPVQAQAQAQAQDEKSAENRGEERNRDSSEERNTNRRESA
EERNANRRERNRERNERNRERNANRNDRGNDRGERNDRSERNDRNDRNANNRRGRGRNQP
DVDDTELNDSDVLLPVAGILDVLDNYAFIRTSGYLAGPSDVYVTLNQVKKYNLRKGDAVV
GAIRAPRENENASSRAKFNALVKLTAINGKNPEENTNRVDFSKLVPLYPTERLRLETDPK
LIGPRVIDLVAPIGKGQRGLIVSPPKAGKTLILQSIANAITTNNPEVHLMMVLVDERPEE
VTDMQRTVKGEVIASTFDRPADDHTTVAELAIERAKRLVEMGMDVVVLLDSMTRLGRAYN
LAAPASGRILSGGVDSSALYPPKRFFGAARNIENGGSLTILATALVETGSKMDEVIFEEF
KGTGNMELRLSRQLADKRIFPAVDVNASGTRREEKLLSPDEVKIMWRLRRVLSGLDTQQA
LETLTGKIRETASNAEFLMVINKTTLGSKNDA
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaaccaccagcctgactgcaggcgtggaagaaaacaacgcatccaagggcggc
ggacttgccggcctaaagcttgcacaattgcaggtacttgcgtcccagctgggaattacc
ggcgggtcgaggatgcgcaagaatgatcttgtcagcgcgatctctagccaccagcgcgga
ggctccgtcgcagaccgcgacgcagccaaggccaaggcggagcccaaggttgaggcagtc
gccgctaccgaggctgctcccgaggccaaggccccggccaaggcaaaaaccgcaccaaag
accggcaaccgccgctcctccagcgcagcagcaaccaagaccgaaaccgaagcagttgcc
gcaccggtagccgccgaggccaaggccgaagcaccggctcgtcgctcccgcagccgccgc
gccgactccagcggaaccgtggccccggccaccgagaccgttgctgcaccggaaccggca
gcagcccaggcacccgccgtcgaggaacgcgcgccgcgacgtaacacccgctcacgccgc
gccgattccaatggcaacgcaccggtagccaccgaagcacccgcggaatctgctcccgta
gcagtggccgaggcccccgccgccgaagccaccgaatcaggcagccagaacaacgaggca
cgcgccgaacgttccgaacgcccggagcgcagcgagcgtaaccgcaatcgtcgtgatcgc
aaccgtaaccgtcgcgagaacaacaacaacgagtcgaacgacaccgttgaagccgtcgag
gctccggtccaggcgcaggctcaggctcaggcacaggacgaaaagtctgccgagaaccgt
ggcgaagagcgtaaccgcgattcctccgaggagcgcaacactaaccgccgcgagtccgcc
gaagagcgcaacgccaaccgccgcgagcgcaaccgtgaacgcaatgagcgcaaccgcgaa
cgcaatgcgaaccgcaatgaccgtggcaacgaccgcggtgagcgcaatgaccgttccgag
cgcaacgatcgtaatgaccgtaacgccaacaaccgtcgcggccgtggccgtaaccagccc
gatgtagatgacaccgagctgaatgactccgacgtcttgctgccggtcgccggcatcttg
gacgtgctggataactacgccttcatccgcacctccggttaccttgccggtccctcggac
gtttacgtcacgctgaaccaggtcaagaagtacaacctgcgcaagggcgatgccgtggtg
ggcgccatccgcgcaccgcgtgaaaacgagaacgcgtcctcacgtgccaagttcaacgcg
ctggtcaagctcaccgcgatcaacggcaagaacccggaggagaacaccaaccgcgttgac
ttctccaagctggttccgctgtacccgaccgagcgtctgcgtctggaaacggatccgaag
ctcatcggcccgcgtgttattgacctcgtggccccgatcggtaagggccagcgtggcctg
atcgtttccccgccgaaggccggtaagacgctgatcttgcagtccatcgccaacgccatc
accaccaataaccccgaggttcacctcatgatggttttggttgacgagcgtcccgaggaa
gtcaccgacatgcagcgcaccgtgaagggtgaggttattgcctcgaccttcgaccggcct
gccgatgaccacaccaccgtggccgagctcgccatcgagcgcgccaagcgcctggtggaa
atgggcatggacgtggtggtcctcttggactcgatgacccgtttgggacgtgcctacaac
ctggctgccccggcttcgggccgtatcctttccggtggtgtcgattcctcggcactgtac
ccgcccaagcgtttcttcggtgctgctcgcaacatcgaaaacggcggctcgctgaccatt
ctggccaccgcgctggtggaaaccggctccaagatggacgaagtcatcttcgaggagttc
aagggcaccggcaacatggagcttcgcctttcccgccagctggcggacaagcgcatcttc
ccggccgttgatgttaacgcctcgggtactcgccgcgaagagaagttgctctcgcccgac
gaggtcaagatcatgtggcgcctgcgccgcgtgctctcgggcctcgacacccagcaggcc
ctggagaccctcaccggcaagatccgtgagacggcctcgaacgccgagttcctgatggtc
atcaacaagaccacgctgggttccaagaacgacgcctag
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