Arthrobacter sp. TES: IG195_11850
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Entry
IG195_11850 CDS
T10985
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
artt Arthrobacter sp. TES
Brite
KEGG Orthology (KO) [BR:
artt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
artt03032
]
IG195_11850 (topA)
03400 DNA repair and recombination proteins [BR:
artt03400
]
IG195_11850 (topA)
Enzymes [BR:
artt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IG195_11850 (topA)
DNA replication proteins [BR:
artt03032
]
Prokaryotic type
DNA Topoisomerases
IG195_11850 (topA)
DNA repair and recombination proteins [BR:
artt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IG195_11850 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QOI62271
LinkDB
All DBs
Position
2580657..2583377
Genome browser
AA seq
906 aa
AA seq
DB search
MPSKAKTGKKLVIVESPAKSKTIAKYLGEGFIVEASIGHIRDLPQPSDLPAELKKTSLGK
FAVDVEHDFKPYYVVSPDKKKKVAELKAQLKDADALYLATDGDREGEAIAWHLLEVLKPK
VPVYRMTFGEITKEAIHRAMDNLRDVDTALVDAQETRRILDRLYGYEISPVLWRKVARGL
SAGRVQSVVTRMVVDRERERMAFKAASYWDLTGQFGAESGSFKAKLAAVDGSKVATGRDF
NDDGQLVSSNVVHLNEELATSLAAGLENADFKVRSVDTKPYTRRPAAPFTTSTLQQEAGR
KLRFSSKSTMQVAQRLYENGYITYMRTDSSALSEEAVTAARRQAAELYGPEFVPQSPRIY
ANKAANAQEAHEAIRPAGDSFRTPAQVAKQLSGDEFRLYELIWKRTVASQMADAKGSTAT
IRLGAVAADGRDAEFSASGTVITFPGFLAAYEEGKDEGRGDDDSDDARRLPNVAKDDSLT
ASDIVAVGHETSPPPRYTEASLTAELEKRGIGRPSTYASTISTIQDRGYVRKQGSALVPS
WIAFSVIRLLEQHFTDYVDYEFTADMEGDLDKIANGQAVGAAWLKHFYYGEDADPGLLSI
VNNLGEIDAREINSVPIADGITLRVGKFGPYLESTIPTVDEKTGEVVESARANVPEELAP
DELTAAKAIELMETAAPEERVLGTDPHTGHTVVAKNGRYGAYVTEIIPEMTEEQLANQPV
EYYKNGKPKPPKKPVKVKPRTGSLFKSMSVDTVTLDEALQLMSLPRVLGEDAEGNPITVQ
NGRFGPYLKKGTDSRSIGSEEEIFTITLEQALEIYSQPKQRGARAAVPPLAEFGPDPVSE
KNIVVKEGRFGPYITDGVTNITVPRSTSLEDLTREQAIELLAEKRAKGPVKRTTRKAPAR
KAAAKK
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
gtgcccagcaaggcaaaaaccggcaagaaactcgtgatcgtggagtctccggccaagagc
aagaccatcgccaagtaccttggcgaaggcttcatcgtcgaggcttccattggtcacatc
cgtgaccttccgcagccgtccgacctccctgcagaactcaagaagacctcgctgggcaag
ttcgctgttgacgttgagcacgacttcaagccgtactacgtcgtctccccggacaagaag
aaaaaggtcgccgaactcaaggcccaactgaaagacgccgacgcgctctacctcgcaacc
gatggggaccgcgaaggcgaagccatcgcgtggcacctccttgaggtcctgaagcccaaa
gttccggtctaccgcatgaccttcggtgaaatcaccaaggaagccatccaccgcgcgatg
gacaacctgcgcgacgtggacactgccctcgttgatgcgcaggaaacccgacggatcctg
gacaggctgtacggctacgaaatttcgccggtgctgtggcgcaaggttgcccgcggcctt
tcggcaggacgcgtgcagtccgtggtgacccggatggtggttgaccgtgaacgtgagcgc
atggcgttcaaggccgcttcctactgggacctaacgggccaattcggcgccgagtcgggc
tccttcaaggccaagcttgctgccgtcgacggctccaaggttgccaccggccgcgatttc
aatgacgacggccagctggtctcctcgaacgtggtccacctcaacgaggaactagccacc
tcccttgctgccggcctggagaacgcggacttcaaggtccgctccgtggacaccaagccg
tacacccgccgtcccgccgctccgttcactacttccacgttgcagcaggaagccggccgt
aagctcaggttctcctccaagagcaccatgcaggttgcgcagcgcctgtacgaaaacggc
tacatcacctatatgcgtacggactcctcggcgttgagcgaagaggccgtcacggccgcg
cgtcgccaggctgctgagctctacggtcccgaattcgtgccgcagagtccgcggatctac
gcgaacaaggccgcgaacgcccaggaagcacacgaggctatccgcccggccggtgactcc
ttccgcaccccggcccaagtggccaagcagctcagcggagacgagttccggctgtacgaa
ctcatttggaagcgcaccgtggcttcccagatggcagatgccaagggctccacggcaacc
atccgccttggcgcagttgccgcggacggcagggacgccgagttctctgcttccggtacc
gtgatcaccttccccggcttccttgccgcctatgaggaaggcaaggacgagggccgcggc
gatgacgactccgacgacgcccgccgcctgccgaacgtggccaaggacgattcccttacc
gcctcggatattgttgcggtcggccacgagacatctccgccgccgaggtacaccgaagcg
tcattgaccgctgaactggaaaagcgaggcattggacgcccgtctacctacgcttcgacc
atttccaccatccaggaccgcggatacgtccgcaaacaaggttccgcgctggtacccagc
tggatcgccttctccgtgatccgcctgctggaacagcacttcaccgactatgtggactac
gaattcaccgctgacatggaaggcgacctggacaagatcgccaacggacaagcagtgggc
gcagcgtggctgaagcacttctactacggagaagatgccgatcccggcctgttgagcatc
gtcaacaaccttggcgagatcgacgcccgcgagatcaactcagtgccgatcgcagacggc
atcacgctgcgggtgggtaagttcggcccgtaccttgaaagcaccatccccacggtcgat
gagaaaaccggggaggtcgtggagtccgcgcgggcaaatgttcccgaggaactggccccg
gatgagctgacggcagccaaggccatcgagctcatggaaacggcggcacccgaggaacgg
gtcctgggaacagatccgcacaccgggcacacagttgtagccaagaacggccgctacggc
gcctacgtcaccgagatcatcccggaaatgacggaagaacagctcgccaaccagccggtc
gagtattacaagaacggcaagccgaagccgcctaagaagcctgtgaaggtcaagccccgc
accggctcgctgttcaagtccatgtccgtggacaccgtcacgctggatgaagctttgcag
ctgatgagcctgccacgggtcctcggcgaggacgcggaaggcaaccccatcaccgtgcag
aacggccgctttgggccttacctgaagaaggggacggactcgcgctccattggttcggag
gaggaaatcttcacgatcaccctggagcaggctctggagatctattcgcagcccaagcag
cgtggcgcccgtgcagcggtcccgccgctggctgagttcggtcccgatcccgtgtcggaa
aagaacatcgtggtgaaggaaggccgcttcggcccctacatcactgacggcgtcaccaac
attacggttccgcgttccacgtccttggaagatctcaccagggaacaggccatcgagctg
ctcgccgagaagcgcgccaagggcccggtgaaacggaccacccgcaaggcaccggcccgc
aaggcagcggcgaagaaatag
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