Arthrobacter sp. UKPF54-2: E7Y32_01795
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Entry
E7Y32_01795 CDS
T10403
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
artu Arthrobacter sp. UKPF54-2
Pathway
artu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
artu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E7Y32_01795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
artu03019
]
E7Y32_01795
03400 DNA repair and recombination proteins [BR:
artu03400
]
E7Y32_01795
Enzymes [BR:
artu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E7Y32_01795
Messenger RNA biogenesis [BR:
artu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E7Y32_01795
DNA repair and recombination proteins [BR:
artu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E7Y32_01795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
MarR_2
HTH_IclR
DUF6887
DUF7343
Motif
Other DBs
NCBI-ProteinID:
QDY89092
UniProt:
A0A5B8JD78
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All DBs
Position
424830..426476
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AA seq
548 aa
AA seq
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MAALAAGRDVLAVMPTGYGKSALYQVPALLLHRQRKGATVVVSPLISLQEDQLDGLAGAL
GPGHAVAVNSSHSAAEQERAWQAAERGEAVFLFLAPEQLAKASTVERLAALTIALFVVDE
AHCVSTWGHDFRPDYLRLGEVRERLGHPTTAALTATAAPPVREEILDRLRLKDPLVLVRG
FDRPNIGLDVVRHHEDKEKRRAVVRRAAKLVSELHGPGLVYAAKRKDTEKYAAKLAQKGL
RAAAYHAGRTPAEREAVHRQFLGGRLDAVVATTAFGMGIDKPDVRFVLHADIPESLDSYY
QQIGRAGRDGLPAQAVLHYRSEDLGLRRYFATHRPDESALLAVLAVLRDAGGSVPPPALA
AATGYPKRRLTGLLNELQDTGGVTPADGGVRLEPGANPAQLVARAVALAAARERVGKSRI
AMMRSYAETHRCRRQFLLGYFGEDLPEPCGNCDNCRDGSASRTHDAVTAAAASAGAAPAD
AEAFPLNSAVEHALWGPGLVMRHDDGLITVLFEREGYKTLSRKAVLASGLLTPAAGARTA
VSRPPGSC
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgctcgccgccgggcgggacgtcctcgcggtgatgcccaccggctatgggaag
tcggcgttgtaccaggtgcccgcgctgctcctgcaccggcagcgcaagggagccaccgtc
gtcgtttccccgctgatctcgctgcaggaggaccagctggacggactggcgggcgccctc
ggcccgggccacgccgtcgccgtcaattcctcgcacagcgccgccgaacaggagcgcgcc
tggcaggcggcggagcgcggggaggccgtcttcctgttcctagccccggaacagctggcg
aaggccagcacggtggagcggctcgcggccctcaccatcgccttgtttgtggtggacgag
gcgcactgcgtctccacctggggccacgacttccggcccgactacctccggctcggcgag
gtccgcgaacgcctgggccatccgacgacggcggcgctcaccgccaccgccgctcccccg
gtccgcgaggaaatcctggaccgcctgcgcctgaaggatccgctggtcctggtccggggc
ttcgaccgccccaacatcggcctcgatgtcgtgcggcatcatgaggacaaggagaagcgc
cgcgcggtggtgcggcgggcagccaagttggtcagcgaactgcacggcccgggcctggtc
tacgccgccaaacgcaaggacacggagaaatacgccgcgaagcttgcgcagaagggactg
cgtgccgccgcgtaccacgcgggccgaacaccggcggagcgggaggcggtccaccggcag
ttcctcggcggccgactcgacgccgtggtggccacgaccgcgttcggcatggggatcgac
aagccggatgtccggttcgtgctgcacgcggacatcccggagtcgctggacagctactac
cagcagatcggccgggccggacgcgacggcctgcccgcccaggccgtgctgcactaccgg
tccgaggacctgggcctgcgccgctacttcgccacccaccgcccggacgagtccgcgctg
ctggccgtcctcgctgtcctgcgcgacgccggcggttccgtgccgccaccggcgctcgct
gcggccacgggctacccgaagcgccggctcacggggctgctcaacgagctgcaggacacc
ggcggcgtgaccccggcggacggcggggtgcgcctggagcccggcgccaatcctgcccag
ctggtggcacgcgccgtcgccctcgcggcggcgcgggaacgcgtgggcaagtcccgcatc
gccatgatgcgcagctatgccgagacgcaccgctgccggcgccagttcctgctgggctac
ttcggcgaggacctacccgagccttgcgggaactgcgacaactgccgggacgggtcggcg
tcccggacgcacgacgccgtcactgccgcggcagcgtcggccggcgcggccccggctgat
gccgaggcgttcccgctgaactccgcggtggaacatgccctctggggcccaggcctggtg
atgcggcacgacgacgggctgatcacggtgctgttcgagcgcgagggctataagaccctg
tcccgcaaggcggtgctggcgagcgggctgctcacgccggcggcgggggcccgaaccgca
gtcagtagaccacccggaagttgctga
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