Arthrobacter sp. UKPF54-2: E7Y32_09190
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Entry
E7Y32_09190 CDS
T10403
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
artu Arthrobacter sp. UKPF54-2
Pathway
artu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
artu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E7Y32_09190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
artu03021
]
E7Y32_09190
03400 DNA repair and recombination proteins [BR:
artu03400
]
E7Y32_09190
Enzymes [BR:
artu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E7Y32_09190
Transcription machinery [BR:
artu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E7Y32_09190
DNA repair and recombination proteins [BR:
artu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E7Y32_09190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Cluap1
DUF4407
Motif
Other DBs
NCBI-ProteinID:
QDY90365
UniProt:
A0A5B8KAX8
LinkDB
All DBs
Position
2004713..2008612
Genome browser
AA seq
1299 aa
AA seq
DB search
MSSESSFGLMQIGLATAEDIRGWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPSRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDADARHEELPNLQVEHDIEKKQLIDNRDSDIATIARDLENE
IARLEGEGAKAADKKKARDSADRQMANVRKRADAEIERLEQVWDRFKNLKVADLEGDEGL
YRELRDRYGMYFEGSMGAEAIKKRLEGFDMQAESDLLRDIIANGKGQRKTRALKRLKVVN
AFLTTNNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERYR
PQVWDVLEEIITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCGAFNADFDGDQ
MAVHLPLSPEAQAEARILMLSSNNILKPSDGRPVTLPSQDMIIGLYHLTTKRVGSAGEGR
IFSSVSEAIMAFDLHELHLNSKVKIRLEDFVPYAGWEAPEGWEPGQTTLVETSLGQVIFN
QTLPADYPWVEAVADKGELSRIVNDLAERYPKVVTAATLDNLKDAGFYWATRSGVTVAIS
DIEVPASKPELLAGYETMAAKIQGQYDKGLIDDDERRQELIEIWNKATNEIAQAMRDSLS
PMNTINRMVSSGARGNWMQVRQIAGIRGLVANPKGEIIPRPIKSSYREGLSVLEYFIATH
GARKGLADTALRTANSGYLTRRLVDVSQDVIVREEDCGTERGLVTPIAVADANGELVLDE
NVENSAYARTLAVDVVDAKGKVLAAAGTDCGDVVIAELFAAGITEVKVRSVLTCESSVGT
CALCYGRSLATGKTVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAVSAGGGDDITQGLP
RIQELFEARTPKGVAPIAEAAGRIAIEESERQMRLVITPDDGSEEIAYPVLRRSRLLIED
GEHVSVGQKLINGPVDPKQVLRIMGPRAAQKFLVDEVQGVYRSQGIGIHDKHVEVIVRQM
LRRVTVIESGESDLLPGELAERSRFEDANRRVVSEGKTPASGRPELMGITKASLATESWL
SAASFQETTRVLTQAAMEGKSDPLLGLKENVIIGKLIPAGTGLPRYTEVTVEPTEEAKAN
LFTGPSAFSDFSYDSLGGDGAPEFHAIPLDDYDLGSDFR
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgaatcctccttcggcctcatgcagatcggcctcgccaccgcggaagacatc
cgtggctggtcttacggcgaggttaagaagccggaaaccatcaactaccgcacgctcaag
cccgagaaggacggcctcttctgcgagaagatcttcggcccgtcccgcgactgggaatgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcggtgtggcgtt
gaggtcacccgcgccaaggtccgccgcgagcgtatgggccacatcgagctggccgccccg
gtcacgcacatctggtacttcaagggtgttccgtcccgcctgggctacctccttgacctg
gcaccgaaggacctcgaaaaggtcatctacttcgccgcctacatgatcaccagcgtcgac
gccgatgcccgccacgaggaactgcccaacctgcaggttgagcacgacatcgagaagaag
cagctgatcgacaaccgcgactccgacatcgccacgatcgcccgcgacctcgaaaacgag
atcgcgcgcctcgagggtgaaggtgccaaggctgccgacaagaagaaggcccgcgactcc
gcggaccgccagatggccaacgtgcgcaagcgcgcggacgccgagatcgagcgccttgag
caggtctgggaccgcttcaagaacctcaaggtcgccgacctcgaaggcgacgaaggcctg
taccgcgaactgcgtgaccgctacggcatgtacttcgaaggctccatgggtgccgaggcc
atcaagaagcgtcttgaaggcttcgacatgcaggccgaatcggacctgctgcgcgacatc
atcgccaacggcaagggccagcgcaagacccgcgccctgaagcgcctgaaggtggtcaac
gcgttcctgaccaccaacaacagcccgctcggcatggtgctggacgccgtcccggtaatc
ccgccggaactgcgcccgatggtccagctggacggcggccgcttcgcgacctccgacctc
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgcctcaagcgcctgcttgacctc
ggtgcgccggagatcatcgtcaacaacgagaagcgcatgcttcaggaagctgttgacagc
ctcttcgacaacggccgccgcggccgtccggtcaccggaccgggcaaccgcccgctgaag
tccctctccgacatgctcaagggcaagcagggtcgtttccgccagaacctcctgggtaag
cgcgttgactactccggtcgttcggtcatcgtcgtcggcccgcagctgaagctgcaccag
tgcggtctgccgaagcagatggccctggagctcttcaagccgttcgtgatgaagcgcctg
gttgacctcaaccacgcgcagaacatcaagtcggccaagcgtatggtcgagcgttaccgc
ccgcaggtctgggacgtgctcgaagagatcatcaccgagcacccggtgctgctgaaccgt
gcacctaccctgcaccgtctcggcatccaggcgttcgagccgcagctggtcgaaggcaag
gcaatccagctccacccgctggtttgtggcgccttcaacgccgacttcgacggcgaccag
atggcagtccacctgccgctgagccccgaagcccaggccgaggcccggatcctgatgctg
tcctcgaacaacatcctgaagccgtccgacggccgcccggtgacgctgccttcgcaggat
atgatcatcggcctctaccacctgaccaccaagcgtgtcggttcagctggcgagggccgg
atcttctcctccgtctcggaagccatcatggcgttcgacctgcacgagctgcacctgaac
tccaaggtcaagatccggctcgaggacttcgtcccctacgccggctgggaagctcccgaa
ggctgggagccgggtcagaccacgctggtcgagacctccctgggccaggtcatcttcaac
cagacgctgcccgcggattacccgtgggtggaggctgttgccgacaagggtgagctgtcc
cggatcgtcaacgacctcgccgagcgctacccgaaggtcgtcaccgcggcaacgctggac
aacctgaaggatgccggtttctactgggcaacccgctcgggcgtaaccgtcgccatctcc
gacatcgaggtcccggcctccaagccggagctcctggccggctacgagaccatggccgcg
aagatccagggccagtacgacaagggcctgatcgacgacgacgagcgtcggcaggaactg
atcgagatctggaacaaggcaaccaacgagatcgcccaggcgatgcgtgacagcctgtcg
ccgatgaacaccatcaaccgcatggtgtcctccggtgcccgtggtaactggatgcaggtc
cgtcagatcgcgggtatccgtggcctggtggccaacccgaagggcgagatcatcccgcgt
ccgatcaagtcctcctaccgcgagggcctgtcggtgctggaatacttcatcgccacgcac
ggtgcccgtaagggtctggccgataccgcgctgcgtaccgccaactcgggttacctgacc
cgtcgtctggtggacgtctcgcaggacgtcatcgtccgtgaagaggactgcggcaccgaa
cgcggcctcgtcaccccgatcgctgtggctgacgccaacggcgagctggtcctggacgag
aacgtcgagaacagcgcctacgcccgcaccctggccgtggacgtcgttgacgccaagggc
aaggtcctggcagcggccggtactgactgcggcgacgtcgtcattgccgaactgttcgca
gccggcatcaccgaggtcaaggtccgctccgtactcacctgtgagtccagcgtcggcacc
tgcgccctgtgctacggccgttcgctggccaccggcaagaccgtggacatcggcgaggcc
gtcggcatcatcgccgcacagtccatcggtgagcccggtacccagctgactatgcgtacc
ttccacaccggcggtgctgtctccgccggcggtggcgacgacatcacccagggtctgccc
cgtatccaggagctcttcgaggcccgtactccgaagggtgtggcgccgattgcggaagca
gccggccgcatcgccatcgaagagtccgagcgccagatgcgcctggtcatcaccccggat
gacggatccgaagagatcgcctacccggtgctgcgccgttcacgtcttctcatcgaagac
ggcgagcacgtcagcgtcggccagaagctcatcaacggtccggtcgaccccaagcaggtg
ctgcgcatcatgggcccccgtgccgcgcagaagttcctggtggacgaagtccagggcgta
taccgcagccagggcatcggtatccacgacaagcacgtcgaggttatcgtccgccagatg
ctgcgccgcgtcacggtcatcgagtccggtgaatcggatctgctgcccggcgagctcgcc
gagcgcagccgcttcgaggacgccaaccgccgcgttgtgtccgagggcaagacgccggcc
tccggccgtcccgagctcatgggtatcaccaaggcgtccctggcgaccgagtcctggctg
tcggcagcttccttccaggagaccacccgcgtcctgacgcaggcggccatggaaggcaag
agcgacccgctgctgggtctcaaggagaacgtcatcatcggtaagctcatcccggccggc
acgggtctcccgcgctacaccgaggtcacggtggaaccgactgaggaagcgaaggccaac
ctgttcaccggcccgagcgctttcagcgacttctcctacgattccctgggcggcgacgga
gctcctgagttccacgccatcccgctggatgactacgacctgggcagcgacttccgctaa
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