Arthrobacter sp. UKPF54-2: E7Y32_11115
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Entry
E7Y32_11115 CDS
T10403
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
artu Arthrobacter sp. UKPF54-2
Pathway
artu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
artu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E7Y32_11115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
artu03021
]
E7Y32_11115
03019 Messenger RNA biogenesis [BR:
artu03019
]
E7Y32_11115
Transcription machinery [BR:
artu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
E7Y32_11115
Messenger RNA biogenesis [BR:
artu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E7Y32_11115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
QDY90699
LinkDB
All DBs
Position
2419518..2421605
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AA seq
695 aa
AA seq
DB search
MTETTELSSAVETSSSAAASAAPAKSSGLAGLKLAQLQALASQLGISGGSRMRKGDLVTA
ISAHRAGTPVSKAPARAAEKASDNGTVAHASASAAAPAAAAAEALAQENPRARTRGRSRR
AGSDGVVTTPAAEAPAAAQVEAPSAPADAAPAEQGAESSDRTRQPRTRNRRRGEAAGQTE
APAEAPAEQASGEQRQERQSEQRQPEQGSDDGQRRENTRGRDNSRDNASGNRDNTRDSAR
DSDDNDGGSRRNRRNRRDRNDRNDRSGGQDNRDNSSRNDRFRDRNERRRGRSQGPDVDDV
EVTEDDVLLPVAGILDVLENYAFIRTSGYLPGPNDVYVSLAQVKKYNLRKGDAVVGAIRA
PREGESQQSNQQQSARQKFNALVRVTSVNGKTPEELKDRVEFAKLVPLYPSERLRLETDP
KKIGPRVIDLVAPIGKGQRGLIVSPPKAGKTLILQSIANAITTNNPEVHLMMVLVDERPE
EVTDMQRTVKGEVIASTFDRPADDHTTVAELSIERAKRLVEMGMDVVVLLDSMTRLGRAY
NLAAPASGRILSGGVDSAALYPPKRFFGAARNIENGGSLTILATALVETGSKMDEVIFEE
FKGTGNMELRLSRQLADKRIFPAVDVNASGTRREENLLSPEEVKIMWKLRRVLSGLETQQ
SLELLTNKIRETQSNVEFLMQVQKTTLGAKSDNDK
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaaccactgagctgtcttcagctgtggaaacatcatcttctgctgccgcatcg
gcagcacccgccaagagcagcggcctcgcgggcctcaagctcgcccagctccaggccctg
gccagccagctgggaatctccgggggctcccggatgcgcaagggcgatctggtgaccgct
atttccgcccaccgcgccggcacccctgtcagcaaggcacccgcccgcgccgccgaaaag
gcgagcgacaacggcaccgtggcgcacgcatcggcttcggccgccgcgccggcagccgca
gcagccgaggctctggcccaggagaacccgcgggcccggacccggggccgcagccgccgc
gccggcagcgacggcgtcgtcaccacccccgccgccgaggcacccgccgccgcgcaggtt
gaggcaccgtccgcccccgctgacgcggctccggcagagcagggcgcagagtccagcgac
cgcacccgccagccgcggacccgcaaccgccgccgcggcgaggccgccggccagaccgaa
gcccccgccgaggccccggccgagcaggcatccggcgaacagcgccaggaacgccagtcc
gaacagcgccagcccgagcagggcagcgacgacggccagcgccgcgagaacacccgcggc
cgggacaacagccgcgacaacgcctcgggcaaccgcgacaacacccgcgacagcgcccgc
gatagcgacgacaatgacggcggcagccgccgcaaccgccgcaaccgccgggaccggaac
gaccgcaacgaccgttccggcggccaggacaaccgcgacaacagctcgcgcaacgaccgc
ttccgcgaccgcaacgaacgccgccgcggccgctcccagggtcccgacgtcgacgacgtc
gaggtcaccgaggacgacgtcctgctgccggtcgccggcatcctggacgtgctggagaac
tacgcgttcatccgcacctcgggctacctgccgggcccgaacgacgtctacgtctccctc
gcccaggtcaagaagtacaacctgcgcaagggcgacgccgtcgtcggcgccatccgcgcg
ccccgtgagggcgagtcccagcagagcaaccagcagcagtccgcgcgccagaagttcaac
gccctggtccgcgtcacctcggtcaacggcaagacccccgaggagctcaaagaccgggtc
gagttcgcgaagctcgtcccgctgtacccctccgagcgcctgcgcctcgagacggacccc
aagaagatcggcccccgcgtcatcgacctggtggccccgatcggcaagggccagcgcggc
ctgatcgtttccccgccgaaggccggcaagacgctcatcctgcagtccatcgccaacgcc
atcaccaccaacaatcctgaggtccacctcatgatggtgctcgttgacgaacgccccgaa
gaagtcacggacatgcagcgcaccgtcaagggcgaggtcattgcctccacgttcgaccgt
cccgccgacgaccacaccaccgtggccgagctttccatcgaacgcgccaagcgcctcgtg
gaaatgggcatggacgttgtggtgctcctcgactcgatgacccgcctgggccgtgcctac
aacctggcggctccggcctccgggcgcatcctctccggcggcgtcgactccgcggcgctg
tacccgccgaagcgcttcttcggtgcagcccgcaacatcgaaaacggcggctcgctgacc
atcctggccaccgcgctcgtcgagaccggttccaagatggacgaggtcatcttcgaagag
ttcaagggcaccggcaacatggaactgcgcctgtcccgccagctcgcggacaagcgcatc
ttcccggccgtggacgtcaacgcgtccggcacccgccgcgaagagaacctgctttccccc
gaggaagtcaagatcatgtggaagctgcgccgcgtcctctccggactcgaaacgcagcag
agccttgagctgctgaccaacaagatccgggagacccagagcaacgtcgagttcctcatg
caggtgcagaagacgacgcttggtgcgaagtccgataacgacaagtag
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