Arthrobacter sp. Hiyo4: AHiyo4_08670
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Entry
AHiyo4_08670 CDS
T08405
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
arty
Arthrobacter sp. Hiyo4
Pathway
arty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AHiyo4_08670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arty03019
]
AHiyo4_08670
03110 Chaperones and folding catalysts [BR:
arty03110
]
AHiyo4_08670
03029 Mitochondrial biogenesis [BR:
arty03029
]
AHiyo4_08670
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arty04147
]
AHiyo4_08670
Enzymes [BR:
arty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AHiyo4_08670
Messenger RNA biogenesis [BR:
arty03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AHiyo4_08670
Chaperones and folding catalysts [BR:
arty03110
]
Heat shock proteins
HSP60 / Chaperonin
AHiyo4_08670
Mitochondrial biogenesis [BR:
arty03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AHiyo4_08670
Exosome [BR:
arty04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AHiyo4_08670
Exosomal proteins of other body fluids (saliva and urine)
AHiyo4_08670
Exosomal proteins of breast cancer cells
AHiyo4_08670
Exosomal proteins of colorectal cancer cells
AHiyo4_08670
Exosomal proteins of bladder cancer cells
AHiyo4_08670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
BAS07445
LinkDB
All DBs
Position
663556..665184
Genome browser
AA seq
542 aa
AA seq
DB search
MAKIIAFDEEARRGLERGLNILADAVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LDDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGADPLSLKRGIE
KAVAAVTVELLASAKEIETKEEIAATASISAGDDEIGALIAEALDKVGKEGVITVEESNT
FGLELELTEGMRFDKGYISAYFVTDTERQETVLEDPYILIVNSKISNVKELVAVLEKVMQ
SNKPLLIIAEDIEGEALATLIVNKIRGTFKSVAVKAPGFGDRRKAQLADIAVLTGGQVIA
EEVGLKLETAGLELLGRARKVVVTKDETTIVEGAGDADQIAGRVSQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
GAKAFANLNLTGDEATGANIVRVAIDAPLKQIAFNAGLEPGVVVDKVRGLPAGHGLNAAT
GEYVDLLAAGINDPVKVTRSALQNAASIAGLFLTTEAVVADKPEKNAPAMGGGDDMGGMG
GF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcattgcatttgatgaagaggcacgccgcggtcttgagcggggcctgaac
atcctcgccgacgccgtcaaggtcaccctcggcccgcgtggacgcaacgtcgtcctcgaa
aagaagtggggcgcccccacgatcaccaacgatggtgtttccatcgccaaggagatcgag
ctggacgacccttacgaaaagatcggcgccgagctggtcaaggaagttgccaagaagacg
gacgacgtcgctggcgacggcaccactacggctaccgtgctggcgcaggccctggtcaag
gaaggcctgcgcaacgtcgcggccggcgctgacccgctgtccctcaagcgcggtatcgag
aaggctgtagcggccgtcacggttgagctgctggcctctgccaaggaaatcgaaaccaag
gaagagattgcggccactgcctccatctccgccggtgacgacgaaattggcgccctgatc
gctgaagccctggacaaggtgggcaaagaaggcgtcatcaccgtcgaggagtccaacacc
ttcggcctggagcttgagctcaccgaaggcatgcgcttcgacaagggttacatctccgcg
tacttcgttacagataccgagcgccaggaaacggtccttgaggacccgtacatcctgatc
gtcaactccaagatctccaacgtcaaggaactggttgctgtcctggaaaaggtcatgcag
tccaacaagccgctgctgatcattgccgaggacatcgagggcgaggccctggccaccctg
atcgtcaacaagatccgtggcaccttcaagtccgtagccgtcaaggcgccgggcttcggc
gaccgccgcaaggcccagctggccgacatcgctgtactcaccggtggccaggtcatcgcc
gaggaagtcggactcaagctggagaccgccggactggaactcctgggacgcgcccgcaag
gttgttgtcaccaaggacgagaccacgatcgttgaaggtgccggcgacgccgaccagatc
gctggccgcgtttcccagatccgtgccgagatcgaaaactccgattcggactacgaccgc
gagaagctgcaggaacgcctggccaagctggctggcggcgttgcagtcatcaaggccggt
gccgcaaccgaggttgagctcaaggagcgcaagcaccgcattgaggacgctgtccgcaac
gcgaaggctgctgttgaagaaggcatcgtcgccggtggcggcgttgcgctgatccaggcc
ggcgccaaggcgttcgcgaacctgaacctgaccggtgacgaagcgacgggtgcgaacatc
gtccgcgttgccattgacgccccgctgaagcagattgccttcaacgccggcctcgagccc
ggcgttgttgtcgacaaggtccgcggcctgcctgcaggccacggcctgaacgcagcaacc
ggcgagtacgttgacctgctggctgccggcatcaacgaccccgtcaaggtaacccgctct
gccctgcagaacgcggcttccattgccggtctgttcctcaccaccgaggccgttgtggcc
gacaagccggagaagaacgctccggccatgggtggcggcgacgacatgggcggcatgggc
ggcttctag
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