Arthrobacter sp. Hiyo4: AHiyo4_16880
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Entry
AHiyo4_16880 CDS
T08405
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
arty
Arthrobacter sp. Hiyo4
Brite
KEGG Orthology (KO) [BR:
arty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arty03016
]
AHiyo4_16880
Enzymes [BR:
arty01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AHiyo4_16880
Transfer RNA biogenesis [BR:
arty03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AHiyo4_16880
Prokaryotic type
AHiyo4_16880
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
MerC
Motif
Other DBs
NCBI-ProteinID:
BAS08266
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All DBs
Position
1272978..1274474
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AA seq
498 aa
AA seq
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MPGGLGDFSDLVDGDVARVRRKLRHGCHPSRHPRTWAGTVVSADILGSVLSGLVIVDKPQ
GWTSHDVVGRMRRLAGTRKVGHAGTLDPMATGVLVVGINKATRLLTYIVGTSKTYTATIR
LGQSTITDDAEGDVIAAVSAAAVADEAIHDGVAGLTGEIQQVPSSVSAIKVNGERAYARV
RSGEEVKLAARPVTIHRFEVHAINREAGGDVVDINVTVECSSGTYIRALARDLGDGLGVG
GHLTALRRTHVGPYSLDQARTLEQLAEELNVLEMSQAARALMPNRELTVEEATEISFGRR
IAAGSEAGDPAAATTEHPAAAFAPDGSLVALLADSGNFAKPVLVFAPGNGASEKTAPRNA
APENAAPANVVPEDAAGGTPRHGRLFLHHPGGRPALQRNLSRCGHPEKSPSDLTILSVAA
VELALLVYLVGSIVRVIAGEPIAGEAWEFWGYLATAMLLPPAAVYWSILERTRWSNFVLA
AVGVTALVMAARMNQIWY
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgccaggcggcctcggtgatttctcggatctggttgacggggacgtcgcgcgcgtgcgc
cgcaagctcaggcatggatgccatcctagccgccacccgcgcacctgggcggggaccgtc
gtcagcgccgatatactgggaagcgtgctttctggactggtgatagtggacaaaccgcag
ggatggaccagccatgatgtggttggtcggatgcggcgtctcgccgggacccggaaagtg
gggcacgccggcacccttgatcccatggctaccggcgtcctggtggtcggcattaacaag
gccacccggctcctgacctacatcgtgggcacgtccaagacgtatacggcaaccatccga
ttgggccagtccaccatcacggacgacgccgaaggtgacgtgattgccgccgtcagtgcc
gccgccgtcgccgatgaagcaattcacgacggcgtcgccggcctcacgggtgaaatccag
caggtgcccagcagcgtcagcgccatcaaagtcaacggtgaacgcgcctacgcccgggtc
cgctccggtgaagaggtaaagctcgcggcgcgcccagtaaccatccaccgtttcgaagtt
cacgccatcaaccgggaagcgggcggcgacgtcgtggacattaatgtcaccgttgagtgc
tcatccggtacctatatccgcgccctcgcccgggacctgggcgacgggctgggagtgggc
ggccatcttaccgccctccgccggacccatgttggcccctactcgctggaccaggcccgg
acgttggaacagttggccgaggagctgaatgtcctggagatgtcccaagctgcccgggca
ctgatgcctaaccgcgaactcacagtggaggaggccaccgagatttccttcggacgccgg
atcgcagcgggatcggaagcaggagatcccgcggctgccaccactgaacacccagcggca
gcgttcgcgccggacggcagcctcgtggcgctcctggcggactccggaaactttgccaag
cctgtcctggtattcgcgccgggcaacggtgcgtccgaaaaaactgcccctcggaatgct
gcgcccgagaatgctgcgcccgcgaatgttgtgcctgaggatgctgcgggcgggacgcct
aggcatggacgcctatttctacatcatcctggtggtcggcctgctctccagcggaatctg
tctcggtgcgggcatcctgaaaaaagccccagcgacctcaccatcctgtccgttgccgcc
gtcgagctggcgctgctggtttacctggtgggttcgatcgtgcgggtgatcgcgggcgaa
ccgattgccggggaagcctgggaattctggggatacctggccacagcgatgctcctgccg
ccggcagccgtgtactggtccatcctggaacggacccgctggagcaactttgtcctcgcc
gccgtcggtgtcacggccttggtgatggccgcccgcatgaaccagatctggtactga
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