Arthrobacter sp. Hiyo4: AHiyo4_18420
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Entry
AHiyo4_18420 CDS
T08405
Name
(GenBank) uncharacterized RNA pseudouridine synthase Mb1738
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
arty
Arthrobacter sp. Hiyo4
Brite
KEGG Orthology (KO) [BR:
arty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arty03009
]
AHiyo4_18420
Enzymes [BR:
arty01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
AHiyo4_18420
Ribosome biogenesis [BR:
arty03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AHiyo4_18420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
BAS08420
LinkDB
All DBs
Position
1391182..1392471
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AA seq
429 aa
AA seq
DB search
MTQAGRQGSPRNSSGRNSSERNAGQGGASRNPAASRNPAQGGASRNPAQGGSGRPSAAGG
GFRAGAGKRNAGFGGGDRPYKAPRPREEPFVDPGDAPATPPAGRGASDWKSAGSTSARKP
AARKPGANKAPGTPGALKPKPRTGRPGAAASRAFGSERFGQNLGPVRKPARKRGPRGDVQ
QSEMHDADGTRLQKVMAQAGVASRRVCEEMIAEGRVEVDGQVVTELGVRVDPKTAVIHVD
GLRIQLDENLVYMVFNKPKGVVSTMEDPDGRPCISDFVRKTHLGERLFHVGRLDVATEGL
LLLTNDGELANRLTHPSYEVPKTYLVQVRGPFPQGVGAQLREGVELEDGFASVDSFKLVD
STPGHVLIEVVLHSGKNRIVRRLFDAVGFPVLRLVRVKVGPIGLGDQRQGSIRNLGKQEV
GHLLASVGL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgacacaggcgggacgccagggttcaccacgtaacagttcgggacgtaacagttcagaa
cgcaatgccggacagggcggtgccagccgcaatccagccgccagccgcaatccggcgcag
ggcggcgcaagccgtaaccctgcacagggcggcagcggccgcccgagcgcggcgggcggc
ggattccgcgccggcgccggcaagcgtaacgccggattcggcggcggagaccgcccgtac
aaggcccctaggccgcgcgaggagccatttgtcgatcccggcgatgctccggcaacgccg
ccggccggccgcggtgcctccgattggaagtccgccggcagcacatcggcgcgcaagcct
gccgcccgcaagccgggcgccaacaaggctcccggcactccgggcgcgctcaagcccaag
ccgcgcaccggccggcccggggccgcggcctcacgcgccttcggcagcgaacggtttggc
cagaaccttgggcccgtccggaagcctgcccgcaagcgcggaccccgcggtgacgttcag
cagtcggaaatgcacgacgccgacggcacccgactgcagaaggtcatggcccaggccggc
gtggcttcgcgccgcgtctgcgaagagatgatcgccgaaggccgggtcgaggtcgacggc
caggttgtcactgagcttggtgtccgcgtggaccccaagacggcagtcatccacgttgat
ggcctgcgcatccagctggatgaaaacctcgtgtatatggtcttcaacaagcccaagggc
gtggtgtccaccatggaggatcccgatggccgtccctgcatcagcgattttgtgcggaag
acccacctgggcgagcgcctgttccacgtgggccggctggacgtcgccaccgaaggcctg
ctgctgctgacgaacgacggcgaactggccaaccggctgacccacccgtcctacgaggtc
cccaagacctacctggtccaagtccgcggcccgttcccgcagggagtcggcgcccagctc
cgggaaggtgtggaacttgaggatggctttgcctctgtcgactccttcaagctggtggac
tccactccgggccatgtgctgatcgaagtggtcctgcactccggcaagaaccggattgtc
cggcgcctgttcgacgccgtcgggttcccggtcctgcgcctggtgcgcgtcaaggtgggt
cccatcggcctgggcgaccagcgccagggcagcatccgcaaccttggcaagcaggaagtc
ggccacctgctggcatccgtaggactctga
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