Arthrobacter sp. Hiyo4: AHiyo4_19200
Help
Entry
AHiyo4_19200 CDS
T08405
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
arty
Arthrobacter sp. Hiyo4
Pathway
arty03030
DNA replication
arty03430
Mismatch repair
arty03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AHiyo4_19200
03430 Mismatch repair
AHiyo4_19200
03440 Homologous recombination
AHiyo4_19200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arty03032
]
AHiyo4_19200
03400 DNA repair and recombination proteins [BR:
arty03400
]
AHiyo4_19200
Enzymes [BR:
arty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AHiyo4_19200
DNA replication proteins [BR:
arty03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AHiyo4_19200
DNA repair and recombination proteins [BR:
arty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AHiyo4_19200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BAS08498
LinkDB
All DBs
Position
1443904..1446933
Genome browser
AA seq
1009 aa
AA seq
DB search
MEAASEFRDIFGAENYFCELMDHGLDIERRVTGDLLRLAKDLNLPLVATNDLHYTHEHDA
KAHEALLAIQSGSTLLEPSYDNGGSRFAFSGSGYYLKSPQEMRELFRDHPDACDNTLLIA
ERCDVSFNTGANYMPRFPCPPGEDETSWLVKEVATGLEYRYPGGVPDKVRTQADYELEVI
TSMGFPGYFLVVADFINWAKKNGIRVGPGRGSGAGSMVAYAMRITDLDPLLHGLIFERFL
NPDRVSMPDFDVDFDDRRRSEVIDYVTRKYGDERVAMIVTYGTIKTKQALKDSSRVLGYP
FSMGEQLTKALPPAVMAKDIPLADIQNKDSKRYSEAGDFRQLIATDPEAAKVFETALGIE
GLKRQWGVHAAGVIMSSDPIIDVIPVMRRIQDGQVITQFDYPTCEGLGLIKMDFLGLRNL
TIISDALENIKLNRGLDLDLDSLALDDVASYELLARGDTLGVFQLDGGPMRSLLKLMKPD
NFEDISAVLALYRPGPMGANAHTDYALRKNGIQEVIPIHPELKEPLAEILGGTYGLIVYQ
EQVMAVAQKLAGYSLGQADILRRAMGKKKKSELDKQFAGFSQGMQDNGYSMAAVKTLWDI
LLPFSDYAFNKAHSAAYGVISYWTAYLKAHFAPEYMAALLTSVGDDKDKSAIYLNECRRM
GITVLPPDVNESALNFTPVGTDIRFGMGAIRNVGVNAVEAMVAAREKEGAYTSFKDYLMK
VPAVVCNKRTIESLIKAGAFDSLNHHRRALAMIHEEAIDSVITLKRNEAIGQFDLFAGFE
AAESEASLSIEIPDLPEWEKKDKLSFERDMLGLYVSDHPLQGLEGLLSQHADQSITSIIG
EDGPHDGAIITISGMITSLSRRIAKASGNAYARAEIEDLGGSMEVMFFGQVYGPIASVLA
EDLIVVVKGRLQRRDDGAIALNCMELSVPDLSEGTNGPVLISMPTHKATEAVVTELGDVL
RNHRGNSEVRLHLQGTPGRKSWAARPSQGESQSVIVRRPEGAPGPNLPG
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
gtggaagccgcctcggaattccgggacattttcggtgcggagaactatttctgcgaactg
atggaccacggcctggacattgaacgccgggtcacgggggacctgctgcggctggccaag
gacctgaacctgccgctggtggcgaccaacgacctgcattacacgcacgaacacgacgcc
aaggcgcacgaggccctgcttgccatccagtcgggttccacgctgctggagccatcgtat
gacaacggcggttcccgcttcgcgttctccggcagcggttactacctcaaatctccgcag
gagatgcgggagctgttcagggaccacccggatgcttgcgacaacaccctgctgatcgcc
gagcggtgcgatgtctcgttcaacaccggtgctaactacatgccgcggttcccgtgcccg
ccgggcgaggacgagacctcctggctggtcaaggaagttgccaccggactggaataccgg
tacccgggaggtgtcccggacaaagtccgcacccaggctgactatgagctcgaagtcatc
acctccatggggttcccgggttacttcctggtggtggccgacttcatcaactgggcgaag
aaaaacggcatccgagtcggtccgggccgtggctccggagccggctccatggtggcgtac
gccatgcgcatcacggacctggatccgctcctgcacggcctgatctttgaacggttcctc
aacccggaccgtgtgtccatgcctgacttcgacgttgacttcgatgaccgtcggcggtcc
gaggtcatcgactatgtgacccggaaatacggcgacgagcgcgtggccatgattgtcaca
tacggcaccatcaagaccaagcaggcgctgaaggactcctcccgtgtgctgggttacccg
ttcagcatgggtgagcagctgaccaaggcgctcccgccagccgtgatggccaaggacatc
ccgctcgccgacatccagaacaaagactcaaagcgctacagcgaggccggtgacttccgc
cagctgattgcaactgatcccgaggccgccaaggtcttcgagacggctctcggcattgag
gggctgaaacgccagtggggcgtgcacgccgccggcgtcattatgtcctcggacccgatc
atcgatgtcatcccggtcatgcggcgcatccaggacggccaggtcatcacgcagttcgac
taccccacctgcgagggcctgggcctgatcaagatggacttcctcggcctgcggaacctg
acgatcatttccgacgccctggagaacatcaagctcaaccggggcctggacctggacctg
gacagcctggccctggatgacgtggcctcgtatgaactgctggcccgcggcgacaccctg
ggcgtgtttcagcttgatggcggccccatgcgctcactgctgaagctgatgaagcctgac
aacttcgaagacatctccgcagtgctcgcgctctaccgccccggtccgatgggcgccaac
gcgcacaccgactacgcgctgcgcaaaaatgggatccaggaagtcattccgatccacccc
gaactcaaggaaccccttgctgaaatcctcggcggaacctacggcctgatcgtctatcag
gagcaggttatggccgtagcccagaagctcgcgggctattccctcgggcaggcagacatt
ctgcggcgcgccatgggcaagaagaagaaatccgagctggacaagcagttcgccggattc
tcccagggcatgcaggacaacggctattccatggccgccgtcaagaccctgtgggacatc
ctgctgccattctccgactacgccttcaacaaggcccactccgccgcctatggcgtgatc
tcctactggaccgcctacctgaaggcgcactttgcgccggaatacatggctgccctgctg
acgtcggtcggtgacgacaaggacaaatcggcaatttacctcaacgaatgccggcgcatg
ggaatcaccgtcctgccgccggatgtgaacgaatccgcgttgaacttcaccccggtaggc
accgacatccgcttcggcatgggcgccatccgcaacgtaggggtcaacgccgtcgaagcg
atggtggccgcgcgcgaaaaggaaggcgcctacacgtccttcaaggattacctcatgaag
gtccccgccgtggtctgcaacaagcggaccattgaatccctgatcaaggccggagccttc
gattccctcaaccaccaccggcgtgcgctggcgatgatccatgaagaggccatcgactcc
gtcatcaccctcaaacgaaacgaagcgatcggccagttcgatctcttcgccggtttcgag
gcggccgaatcagaagcgtcgctgagcatcgagattcccgacctgcccgaatgggagaag
aaggacaagctctcgtttgagcgcgacatgctcggcctgtatgtgtcggaccacccgctg
cagggcctggaaggactcctcagccagcatgcggaccagtccatcacctcgatcatcggc
gaagacggaccgcacgacggcgccatcatcactatctccggcatgatcacctcgctcagc
cgcaggatcgcgaaggcgagtggcaacgcctatgcccgtgccgaaatcgaagacctcggc
ggttcgatggaggtgatgttcttcggccaggtgtacggccccatcgcctcggtccttgcc
gaagacctgatcgtggtggtcaagggccgcctgcagcggcgggacgacggtgccatcgct
ttgaactgcatggaactgtccgttccggacctcagtgaaggaaccaacggccccgtgctc
atttcgatgcccactcacaaggccaccgaggctgttgtcaccgaactgggcgatgtcctg
cgcaaccaccggggaaactcggaagtccggctgcacctgcaggggacacccggacggaag
tcatgggctgcccgtccatctcagggtgaatcccagtccgtcattgttcggcgacctgaa
ggtgctcctgggcccaacctgcctggataa
DBGET
integrated database retrieval system
