Arthrobacter sp. Hiyo4: AHiyo4_22940
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Entry
AHiyo4_22940 CDS
T08405
Name
(GenBank) uvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
arty
Arthrobacter sp. Hiyo4
Pathway
arty03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
arty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AHiyo4_22940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arty03400
]
AHiyo4_22940
DNA repair and recombination proteins [BR:
arty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AHiyo4_22940
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AHiyo4_22940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_16
RsgA_GTPase
nSTAND1
AAA_22
APS_kinase
DnaJ_CXXCXGXG
nSTAND3
NACHT
PRK
Viral_helicase1
cobW
ScfRs
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
BAS08872
LinkDB
All DBs
Position
1719927..1722773
Genome browser
AA seq
948 aa
AA seq
DB search
MVKGAREHNLRNVDLDLPRDAMIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAYARQF
LGQVDKPDVDFIEGLSPAVSIDQKSTSKNPRSTVGTITEIYDYMRLLWARVGRPHCPVCG
EVVARQTPQQIVDQLLELDEGTRFQVLAPVVRGRKGEFVDLFKELTAKGYSRARVDGELI
QLSEPPKLGKQFKHTIEVVVDRLVVKEGISQRLTDSVETALGLAEGRVLAEFVDLDADAP
GRLRAFSENLACPNEHPLAIDEIEPRSFSFNNPFGACSACSGIGTRLEVDEELIIPNPEL
SLSEGAIAPWSLGTAITEYWNRLLEGLSKELGFSMDTPWEKLGNDVRQTVLHGKDHKVVV
QYKNRFGRERKYSTGFEGAIQYVHRKHGETDSEWARDRYEEYMRQIACPACNGARLNPAS
LSVLINGKSIADVAAMPMRVCADFLNNLVLTGREAQIAHQVLKEIQARLTFLLDVGLEYL
NLERPSATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIDTLTRLRDMG
NTLIVVEHDEDTIQVADWIVDIGPGAGEHGGQVVHSGSYQDLLANTDSLTGDYLSGRKKI
DIPKKRRKYDKKRELRVVGARENNLVNVDAAFPLGLFTAVTGVSGSGKSTLVNEILYKVL
ANKLNGAKQVAGRHKSIMGLEHLDKVVHVDQSPIGRTPRSNPATYTGVFDNIRKLFAETT
EAKVRGYLPGRFSFNVKGGRCEACAGDGTLKIEMNFLPDVYVPCEVCHGERYNRETLEVH
YKGKTIADVLNMPIEEGAEFFAAFSPIARHLNTLVDVGLGYVRLGQPATTLSGGEAQRVK
LAAELQKRSNGRSVYVLDEPTTGLHFEDIRKLLMVLQSLVDKGNTVITIEHNLDVIKSAD
WIVDLGPDGGSGGGQIVATGTPEQVSKSTKGHTASFLAEILGEAVGVR
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
gtggtcaaaggggcgcgcgagcataatttgcgcaacgtggacctggatctgccccgcgat
gccatgatcgttttcaccgggctgtccggttccgggaagtcgtccctggcgttcgacaca
atcttcgccgagggccagcggcgctacgttgagtccctgtcggcctatgcccgccagttc
ctcggtcaggtggacaagccggacgtcgatttcatcgaggggctctcgccggcggtatcg
attgaccagaagtccaccagcaagaacccccggtccacggttggcaccatcaccgaaatt
tatgactacatgcgattgttgtgggcacgcgtgggacggccgcattgcccggtctgtggc
gaggttgtggccaggcagactcctcagcagatagtggaccagctacttgagcttgacgaa
ggcacgcgattccaggtcctggcgccggtggtgcgggggcgcaagggcgagttcgtggac
ctcttcaaggagctgaccgccaagggctattcgcgtgcccgggtggacggtgagctgatc
cagctgagcgagccgcccaaactcggcaagcagttcaagcacaccattgaggtggtggtg
gaccgtctggtggttaaggaaggcatcagccagcgcctcacggactccgttgaaacggcg
cttggcctggccgaaggccgggtgttggccgagttcgtcgatctggacgcagacgcgccg
ggacggctgcgggcattttccgagaacctcgcctgccctaacgaacatcccctggccatc
gatgaaatcgagccgcggtccttctccttcaacaacccattcggcgcctgttccgcgtgc
agcggcatcggcacacggctcgaggttgacgaagaactgatcattccgaatcctgagctg
tcgttgtccgagggcgccatcgcgccgtggtcacttggcaccgcaataaccgagtattgg
aaccgcctgctcgaagggctgtccaaggagcttggcttctccatggacacaccctgggaa
aagctgggcaacgacgtccgccagaccgtcctgcacggcaaggaccacaaggtggttgtc
cagtacaagaaccgcttcggacgcgaacgtaagtacagcaccggcttcgaaggtgccatc
cagtacgtccaccgcaagcacggtgagacggactccgaatgggcgcgcgaccgctacgaa
gagtacatgcggcagatcgcgtgccccgcgtgcaatggcgccaggctcaaccccgcctcg
ctgtccgtcctgatcaacggcaagtccatcgccgatgtcgcggccatgcccatgcgcgta
tgcgcggacttcctgaacaacctggtcctcaccggccgcgaggctcagatcgcccaccaa
gtgctcaaggaaatacaggcccggctgaccttcctgctcgacgtcgggctggaatacctg
aatctcgagcgcccctccgccaccttgtccggcggcgaagcgcagcggatccggctcgcc
acccagatcggttccggcctcgtgggcgtcctgtacgtcctggacgagccttccatcggc
ctccaccagcgcgacaaccgccggcttattgacaccctgacccggctccgcgacatggga
aacaccctcatcgttgtcgagcacgatgaggacaccatccaggtggcggactggatcgtg
gacatcgggcccggcgcaggcgagcacggcggccaggtggtgcactcggggtcctaccag
gatctcctggccaacaccgactcactgaccggcgattacctgtccggccgcaagaagatc
gacatccccaagaagcggcgcaaatacgacaaaaagcgtgagctgagggtcgtcggggcg
cgtgaaaacaacctggtaaacgttgatgcggccttccccctgggcctgttcaccgccgta
accggcgtcagcggctccggcaaatccaccctggtcaacgagatcctctacaaggtgctg
gccaacaagctcaacggcgccaaacaggtggccggacgccacaagagcatcatgggcctg
gagcacctggacaaggtggtgcacgtggaccaaagccctatcgggcgcaccccacgctcc
aacccggccacgtacaccggagtctttgacaacatccgcaagctcttcgccgagaccacc
gaggccaaggtccgtggctacctgccgggccggttctccttcaacgtcaagggcgggcgc
tgcgaagcctgcgcaggtgacggcacgctgaagatcgaaatgaacttcttgccggacgtg
tacgtgccctgcgaggtgtgccacggcgaacggtacaaccgcgaaaccctcgaagtccac
tacaagggcaagaccatcgcggatgtgctcaacatgcccatcgaagaaggtgcggagttc
ttcgctgccttctccccgatcgcccggcacctcaacaccctcgtggacgtgggcctcggc
tacgtacgtctgggacagccggcaaccaccctctccggcggcgaggcccagcgtgtcaag
ctcgccgcggaactgcagaagcgctccaacggacgcagtgtgtatgttctcgacgagccc
accacgggcctgcacttcgaggacatccgcaagctcctgatggtccttcaaagtctggtg
gacaagggcaatacggtgatcaccatcgaacacaacctggacgtcatcaagagcgccgac
tggatcgtggatcttggcccggacggcggttcgggcggcggccagatcgtagccaccggc
acgcccgagcaggtatcgaaatccaccaagggccacacggcatccttcctcgcggaaata
ctgggcgaagcggttggcgtccgatga
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