Arthrobacter sp. Hiyo4: AHiyo4_31180
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Entry
AHiyo4_31180 CDS
T08405
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
arty
Arthrobacter sp. Hiyo4
Pathway
arty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AHiyo4_31180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arty03021
]
AHiyo4_31180
03019 Messenger RNA biogenesis [BR:
arty03019
]
AHiyo4_31180
Transcription machinery [BR:
arty03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AHiyo4_31180
Messenger RNA biogenesis [BR:
arty03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AHiyo4_31180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Spore_III_AA
PIP5K
Motif
Other DBs
NCBI-ProteinID:
BAS09696
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Position
complement(2308860..2310089)
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AA seq
409 aa
AA seq
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MQKPLRPRPSRPPLNSARLTAPKPSVPIPREPKPREPNPATASVLTAARAAAPVAPAKPP
AAKPLPATPLPRNHRPRHHCPRHHCRETTDGGRENAGSRDAGQRDGARRDDSRDNARDGD
DTDGGSRRNRRNRRDRNDRNDRSDRSGGGQDSRDNSRNDRFRDRNDRRRGRTQGPDVDDV
EVTEDDVLLPVAGILDVLENYAFIRTSGYLPGPNDVYVSLAQVKKYNLRKGDACVGAIRA
PREGEDRSQQTARQKFNALVRVTSVNGKTPEELKDRVEFAKLVPLYPSERLRLETDPKKI
GPRVIDLVAPIGKGQRGLIVSPPKAGKTLILQSIANAITTNNPEVHLMMVLVDERPEEVT
DMQRTVKGEVIASTFDRPADDHTTVAELSIERAKRLVEMAWTWWSSWTP
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagccactgaggccccggccgagcagaccgccgctgaacagcgccaggctgacc
gcaccgaaacccagcgtgccgattcccagggaaccgaaacccagggagccgaatccggcg
acggccagcgtgctgaccgccgcgagggcggccgcacccgtggcacccgcgaaaccaccg
gccgcgaaaccactgcccgcgacaccactgccgcgaaaccaccggccgcgacaccactgc
ccgcgacaccactgccgcgaaaccaccgatggcggccgcgagaacgcaggcagccgtgac
gccggccagcgcgacggcgcccgacgcgatgacagccgcgacaacgcccgcgatggcgac
gacactgacggcggcagccgccggaaccgccgcaaccgccgcgaccggaacgaccgcaat
gaccggagcgaccgctccggtggcggccaggacagccgggacaactcgcgtaacgaccgt
ttccgcgaccgcaacgaccgccgtcggggacgcacgcagggaccggacgtcgacgacgtc
gaggtcaccgaggacgatgtcctgctgcccgtcgccggcatcctggacgtgctggagaac
tacgcgttcatccgcacctccggttacctgccgggcccgaacgacgtttacgtctccctg
gcccaggtcaagaagtacaacctgcgcaagggcgacgcctgcgtgggtgccatccgtgca
ccgcgtgaaggcgaagaccgcagccagcagactgcccgccagaagttcaacgccctggtc
cgcgtcacctccgtcaacggaaagacgccggaagagctcaaggaccgcgtcgaattcgcc
aagctggttccgctgtacccgtccgagcgcctgcgccttgagacggatcccaagaagatc
ggcccccgcgtcatcgacctggttgccccgatcggcaagggccagcgcggcctgatcgtc
tccccgccgaaggccggcaagacgctcatcctgcagtccatcgccaacgccatcaccacc
aacaatcctgaggtccacctcatgatggtgcttgttgacgaacgccccgaagaagtgacg
gacatgcagcgcaccgtcaagggtgaggtcattgcctccaccttcgaccgtcccgccgat
gaccacaccaccgtggccgagctctccatcgaacgcgccaagcgcctcgtggaaatggca
tggacgtggtggtcctcctggactccatga
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