Arthrobacter sp. Hiyo4: AHiyo4_36270
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Entry
AHiyo4_36270 CDS
T08405
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
arty
Arthrobacter sp. Hiyo4
Pathway
arty03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
arty00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AHiyo4_36270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arty03021
]
AHiyo4_36270
03400 DNA repair and recombination proteins [BR:
arty03400
]
AHiyo4_36270
Enzymes [BR:
arty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AHiyo4_36270
Transcription machinery [BR:
arty03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AHiyo4_36270
DNA repair and recombination proteins [BR:
arty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AHiyo4_36270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BAS10205
LinkDB
All DBs
Position
complement(2698808..2699818)
Genome browser
AA seq
336 aa
AA seq
DB search
MLIAQRPTLSEEVVSDNRSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTEIILNIKSLSVSSEHDEPVVAYLRKQGPGVVTAADIAPPAGVEFHN
PDLHIATLNSKGKFELELTIERGRGYVSAAQNKSGDSEIGRIPVDSIYSPVLKVTFRVEA
TRVEQRTDFDKLIVDVETKQAIAPRDAVASAGTTLVELFGLARELNTAAEGIEIGPSPTD
AALAADMALPIEDLDLTVRSYNCLKREGIHTVGELVARSEADLMDIRNFGAKSIDEVKAK
LVELGLSLKDSPPGFDLAARAAAIEEDDAAFGDDEL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattgcacagcgccccaccctctccgaagaggtagtctccgataaccgctcgcgt
ttcatcattgaaccgctggaaccgggcttcggctacaccctcggaaactccctccgccgt
accctgctttcctccatccccggtgccgctgtaaccagcatccggatcgatggcgtgctg
cacgagttcaccacggttccgggtgtcaaggaagatgtcactgagatcatcctgaacatc
aagagcctgtcggtttcctcggagcacgatgagccggttgtggcttacctgcgcaagcag
ggcccgggagtcgtcaccgccgcggacatcgctccgccggccggcgtcgaattccacaac
ccggatctgcacattgccacgctgaactcgaagggcaagttcgaactcgaactgaccatc
gagcgcggccgcggctacgtttcggcagctcagaacaagtccggcgactccgagatcggc
cgtatcccggtcgactcgatctactcgccggtcctgaaggttactttccgcgtggaagca
acccgtgttgagcagcgcaccgacttcgacaagctcattgtcgacgtcgagaccaagcag
gccatcgccccgcgcgatgctgttgcttccgctggtaccaccctggtggaactcttcggt
ctggcccgcgagctgaacaccgcagctgaaggtatcgagattggcccgtcgccgacggat
gctgccctggcagcagacatggcactgccgatcgaggatctggacctcaccgtccgttcc
tacaactgcctcaagcgtgagggcatccacaccgtgggtgaactcgttgcacgctccgag
gctgacctcatggacatccgtaacttcggtgcgaagtccattgacgaggtcaaggcaaag
ctggttgaactgggcctgtccctcaaggactcgcctcccggttttgacctcgcagcacgc
gccgcagcaattgaagaggacgacgccgctttcggcgacgacgaactctaa
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