Arthrobacter sp. 24S4-2: FCN77_05350
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Entry
FCN77_05350 CDS
T10423
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
artz Arthrobacter sp. 24S4-2
Pathway
artz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
artz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FCN77_05350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
artz03019
]
FCN77_05350
03400 DNA repair and recombination proteins [BR:
artz03400
]
FCN77_05350
Enzymes [BR:
artz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FCN77_05350
Messenger RNA biogenesis [BR:
artz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FCN77_05350
DNA repair and recombination proteins [BR:
artz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FCN77_05350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
DUF7343
ResIII
HTH_IclR
HTH_Crp_2
HTH_24
HTH_11
Rrf2
MarR_2
MarR
HTH_31
Dimerisation
HTH_Mga
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QCO97249
UniProt:
A0A4P8GP52
LinkDB
All DBs
Position
complement(1131071..1132831)
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AA seq
586 aa
AA seq
DB search
MTEAPTPAVPAKPIADVPVPTDTDAGLRQLAADTFGLPHLRTGQLAGMRALVAGQDVLAV
MPTGYGKSAIYQVAALALHRNQGQGAQNPSQPGSARRGPAVVVSPLIALQEDQLDGLLED
LGREAAVAINSGRSDSEVHHAWEAAERGDAVFVFLAPEQLAKTETVERLAALDVSLFVVD
EAHCVSSWGHDFRPDYLRLGEVRGQLGNPPVVGLTATASPPVRDEIQQRLRMKDPLVLVH
GFDRPNIRLEVIRHHTDRDKRRAVTEQVAALKGPGLLYAATRKDTEAYAAELTERGLRTE
AYHAGRKQDERDRVHEQFLDDHLDVVVATTAFGMGIDKPNVRFVIHADIPESLDSYYQEI
GRSGRDGEPAAAVLHYRPEDLGLRKFFGTHAPDEESLLAVLQVLRAADGPLKQKALAEQT
GLSPRKLTGLLNQLQETGAVKSGRRGIRLKTKPELPTVVEHAVERAEARQRVDRSRIEMM
RGYAETYGCRRQFLLGYFGEDLPEPCGNCDTCTDGSAYEEDYDDAAAAAAGGEPFPLQAA
VIHKVWGPGLVMRHEEDVITVLFEQEGYKTLSRRAVAEGKLLTLAT
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggcgcctacccccgcagtccccgctaagcccatcgccgatgtccctgtcccc
acagacaccgacgccggcctccgccagcttgcggccgataccttcggactcccccacctc
cgcaccggccaactcgccgggatgcgcgccctcgtcgccggccaggacgtcctcgccgtc
atgcccaccggctacggcaagtcagccatctaccaggtggccgcgctggcgctgcaccga
aaccaggggcaaggggcccagaaccccagccaacccggcagcgcaaggcgcggtcccgcc
gtcgtggtttccccgctgatcgccctgcaggaggaccagctggacggcctgctggaggac
ctgggcagggaggccgccgtcgccatcaactccggccgcagcgattccgaggtgcaccac
gcctgggaagccgccgagcggggcgacgccgtcttcgtcttcctggcccccgagcagctg
gccaagactgaaaccgtggaacggctcgcggccctggacgtctcgctgttcgtggtggac
gaggcacactgcgtctcctcctggggccacgacttccgccccgactacctgcgcctcggc
gaggtccgcgggcaactgggaaacccgccggtcgtcggcctcaccgccaccgcctctccc
ccggtccgcgacgaaatccagcagcgactgcgcatgaaggacccgctggtcctggtgcac
ggcttcgaccggcccaacatccggctggaagtcatccgccaccacacggaccgggacaag
cgccgcgccgtgacggagcaggtggccgcgctcaagggtcccggcctgctgtacgccgcc
acccgcaaggacaccgaggcctacgccgccgagctcaccgaacgcggcctgcgcaccgag
gcctaccacgccggccggaagcaggacgagcgggaccgtgtccacgagcagttcctggac
gaccacctcgacgtcgtggtggccaccaccgccttcggcatgggcatcgacaaacccaac
gtccgcttcgtcatccacgccgacatccccgaatcgctggacagctactaccaggagatc
ggccgctccggacgcgacggcgaacccgccgccgccgtcctccactaccggcccgaggac
ctgggcctgcgcaagttcttcggcacgcatgctccggacgaggagtcgctcctggccgtc
cttcaggtgctgcgcgccgccgacgggccgctgaagcagaaggccctcgcggagcagacc
ggcctctccccgcggaagctcaccgggctcctgaaccagctgcaggaaacgggcgccgtg
aagtccggcaggcgcggcatccggctcaaaaccaaacccgagctgcccacggtggtggag
cacgccgtcgaacgcgccgaagcacgccagcgggtggaccgctcccgcattgagatgatg
cgcggctacgccgagacgtacggctgccggcgccagttcctgctgggctatttcggcgag
gacctcccggagccctgcggcaactgcgatacctgcaccgatggttccgcctacgaggag
gattacgacgacgccgccgcggccgccgcgggcggggaacctttcccgctccaggccgca
gtcatccacaaggtatgggggccgggcctggtgatgcggcatgaggaggacgtgatcacc
gtgctgttcgagcaggaaggctacaagacgctgtcccgccgggccgtggcggaaggcaag
ctgcttacgctcgcgacgtga
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