Arthrobacter sp. 24S4-2: FCN77_17050
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Entry
FCN77_17050 CDS
T10423
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
artz Arthrobacter sp. 24S4-2
Pathway
artz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
artz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FCN77_17050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
artz03021
]
FCN77_17050
03019 Messenger RNA biogenesis [BR:
artz03019
]
FCN77_17050
Transcription machinery [BR:
artz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FCN77_17050
Messenger RNA biogenesis [BR:
artz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FCN77_17050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
QCO99091
LinkDB
All DBs
Position
complement(3663695..3665866)
Genome browser
AA seq
723 aa
AA seq
DB search
MTETTELSPAVDISSSATELSSAAPAKSSGLAGLKLAQLQALASQLGISGGSRMRKGDLV
TAISAHRAGTPATKAPAKGADKAGENISARATAPAAAAPAAEAAEAPAQEGTRARRGRSR
RAGSDGVVTAAATEAPAPEAAPSEAPSAPSAPETGQPAVAEAAPAEGAERRQPRTRNRRR
GEAAAQVSAPATEGEAQAEAPAEQRGEQREQRGEQRTEQRGEQRTEQRGGEQGEAAAEAG
QRNERQTTRTRGGRDGGDTTGTRDTRREDTRDNTRDSEDADGGSRRNRRNRRDRNDRSGG
QDTRDNSRNDRFRDRNDRRRGRAQGPDVDDVEVTEDDVLLPVAGILDVLENYAFIRTSGY
LPGPNDVYVSLAQVKKYNLRKGDAVVGAIRAPRDGEDRSQQSARQKFNALVRVTSVNGKT
PEELKDRVEFAKLVPLYPSERLRLETDPKKIGPRVIDLVAPIGKGQRGLIVSPPKAGKTL
ILQSIANAITTNNPEVHLMMVLVDERPEEVTDMQRTVKGEVIASTFDRPADDHTTVAELS
IERAKRLVEMGMDVVVLLDSMTRLGRAYNLAAPASGRILSGGVDSAALYPPKRFFGAARN
IENGGSLTILATALVETGSKMDEVIFEEFKGTGNMELRLSRQLADKRIFPAVDVNASGTR
REENLLSPEEVKIMWKLRRVLSGLETQQSLELLTNKIRETQSNVEFLMQVQKTTLGAKSD
NDK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaaccactgagctgtcgccagctgtggacatatcatcttctgctaccgagttg
tcttcggcagcacccgccaagagcagcggccttgcaggccttaagctcgcccagctgcag
gcacttgccagccagctgggtatctccggcggatcccgcatgcgcaaaggtgatctcgtg
accgccatttccgctcatcgtgcgggcaccccggcaaccaaggccccggccaagggcgct
gacaaggccggcgaaaacatctcggcacgggcaaccgcgccggctgcggccgcacctgcg
gctgaagccgccgaggctcctgcccaggaaggcacccgtgcccgccgtggccgcagccgc
cgcgccggcagcgacggtgttgtgaccgccgcggccaccgaggcacctgccccggaagcc
gcccccagcgaagcaccctccgccccgtcggctcccgaaacaggccagccggcggtggct
gaagccgccccggctgaaggcgccgagcgccgccagccccgcacccgcaaccgccgccgc
ggcgaagcggcggcacaggtttccgccccggcgaccgaaggtgaagcccaggctgaggcc
cccgccgaacagcgtggcgagcagcgtgaacagcgcggcgagcagcgcacggaacagcgc
ggcgagcagcgcaccgagcagcgtggtggagagcagggcgaagctgctgccgaagccggc
cagcgcaacgaacgccagaccacccgcacccgtggcggccgcgatggcggagacaccacc
ggtacccgcgacacccgccgcgaggacacccgcgacaacacccgcgacagtgaagatgca
gacggcggaagccgccgcaaccgccgcaaccgccgtgaccgcaacgaccgctccggtggt
caggacacccgcgacaactcgcgcaacgatcgcttccgcgaccgcaacgaccgccgccgc
ggacgcgcccagggaccggacgtcgacgacgtcgaggtcaccgaggacgacgtcctgctg
cccgttgcaggtatcctggacgtcctggaaaactacgctttcatccgcacctccggttac
ttgccgggcccgaacgatgtctacgtatccctcgcacaggtcaagaagtacaacctgcgc
aagggcgacgccgtcgtcggcgccatccgcgccccgcgtgacggcgaggaccgcagccag
cagtccgcccgccagaagttcaacgccctggtgcgtgtcacctcggtgaacggcaagacg
ccggaagaactcaaggaccgtgtcgagttcgcgaagctcgtgccgctgtacccgtccgag
cgcctgcgccttgagacggacccgaagaaaatcggcccccgtgtcatcgacctggttgcc
ccgatcggcaagggccagcgtggcctgatcgtttcgccgcccaaggccggcaagacgctc
atcctgcagtccatcgccaacgccataaccaccaacaatcctgaggtccacctcatgatg
gtgctcgttgacgaacgccccgaagaagtcacggacatgcagcgcaccgtcaagggcgag
gtcattgcctccaccttcgaccgtcccgccgacgaccacaccaccgtggccgagctttcc
atcgaacgcgccaagcgcctcgtggaaatgggcatggacgttgtggttctcctcgactcg
atgacccgcctgggccgcgcgtacaacctggcagcaccggcctccggccgtatcctgtcc
ggtggtgtggactccgccgcgctgtacccgccgaagcgcttcttcggtgcagcccgcaac
atcgaaaacggcggctcgctgaccatcctggcaacggccctcgtggagaccgggtccaag
atggacgaggtcatcttcgaagagttcaagggcaccggcaacatggagctccgcctgtcc
cgccagctggcggacaagcgcattttcccggccgtggacgtcaacgcctccggtacccgc
cgcgaagagaacctgctttcccccgaggaagtcaagatcatgtggaagctgcgccgcgtc
ctttccggactcgaaacgcagcagagccttgagctgctgaccaacaagatccgggagacg
cagagcaacgtcgagttcctcatgcaggtccagaagacgacgcttggtgcgaagtccgat
aacgacaagtag
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integrated database retrieval system
