Arthrobacter sp. 24S4-2: FCN77_19060
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Entry
FCN77_19060 CDS
T10423
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
artz Arthrobacter sp. 24S4-2
Pathway
artz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
artz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FCN77_19060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
artz03021
]
FCN77_19060
03400 DNA repair and recombination proteins [BR:
artz03400
]
FCN77_19060
Enzymes [BR:
artz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FCN77_19060
Transcription machinery [BR:
artz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FCN77_19060
DNA repair and recombination proteins [BR:
artz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FCN77_19060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Cluap1
DUF4407
Motif
Other DBs
NCBI-ProteinID:
QCO99419
LinkDB
All DBs
Position
complement(4106988..4110887)
Genome browser
AA seq
1299 aa
AA seq
DB search
MSSESSFGLMQIGLATAEDIRGWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPSRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDADSRHEELPNLQVEHDIEKKQLVDNRDSDIATIARDLENE
LARLEGEGAKAADKKKARDSADRQMANVRKRADADIERLEQVWDRFKNLKVADLEGDEGL
YRELRDRYGMYFEGSMGAEAIKKRLENFDMQAESDLLRDIIANGKGQRKTRALKRLKVVN
AFLTTNNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERYR
PQVWDVLEEIITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCGAFNADFDGDQ
MAVHLPLSPEAQAEARILMLSSNNILKPSDGRPVTLPSQDMIIGLYHLTTKRVGSAGEGR
IFSSVSEAIMAFDLHELHLNSQVKIRLEGFVPYAGWEAPEGWEPGQTALVQTSLGQVIFN
ETLPEDYPWVEAVADKGELSRIVNDLAERYPKVVTAATLDNLKDAGFYWATRSGVTVAIS
DIEVPVEKPVILAGYEERAAKIQGQYDKGLIDDDERRQELIEIWNKATNEIAQVMRDNLS
PMNTINRMVSSGARGNWMQVRQIAGIRGLVANPKGEIIPRPIKSSYREGLSVLEYFIATH
GARKGLADTALRTANSGYLTRRLVDVSQDVIVREEDCGTERGLITPIAVADANGELVLDE
NVENSAYARTLAVDVVDSKGKVLAPAGTDCGDVVIAELFAAGITEVKVRSVLTCESSVGT
CALCYGRSLATGKTVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAVSASGGDDITQGLP
RIQELFEARTPKGVAPIAEAAGRIAIEESERQMRLVITPDDGSEEIAYPVLRRSRLLIED
GQHVAVGQKLINGPVDPKQVLRIMGPRAAQKFLVDEVQGVYRSQGIGIHDKHVEVIVRQM
LRRVTVIESGESDLLPGELAERSRFEDANRRVVSEGKTPASGRPELMGITKASLATESWL
SAASFQETTRVLTQAAMEGKSDPLLGLKENVIIGKLIPAGTGLPRYTEVTVEPTEEAKAN
LFTGPSAFSDFSYDTLGGDGAPEFHAIPLDDYDLGNDFR
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgaatcctccttcggcctcatgcagatcggcctcgccaccgcggaagacatc
cgtggctggtcttacggcgaggttaagaagccggaaaccatcaactaccgcacgctcaag
cccgagaaggacggcctcttctgcgagaagatctttggcccgtcccgcgactgggaatgc
tactgcggcaagtacaagcgtgtgcgcttcaagggcatcatttgtgagcggtgtggcgtt
gaggtcacccgtgccaaggtgcgccgcgagcgcatgggccacatcgagctggctgcgccc
gtaacgcacatctggtacttcaagggtgttccgtcccgcctgggctacctccttgacctg
gcgccgaaggacctcgaaaaggtcatctacttcgctgcctacatgatcacgagcgtcgac
gccgacagccgccacgaggaactgcccaacctgcaggttgagcacgacatcgagaagaag
cagttggtagacaaccgcgactcggacatcgccacgatcgcccgcgaccttgagaacgag
cttgcccgtctcgaaggcgaaggcgccaaggctgccgacaagaagaaggcccgcgattcc
gcggaccgtcagatggccaacgtgcgtaagcgtgccgacgccgacatcgagcgccttgag
caggtctgggaccgtttcaagaacctgaaggtcgctgacctcgaaggtgatgaaggcctc
taccgcgaactgcgtgaccgctacggcatgtacttcgaaggctccatgggtgccgaagcc
atcaagaagcgtcttgagaacttcgacatgcaggccgagtcggacctcctgcgcgacatc
attgccaacggcaagggccagcgcaagacccgcgccctgaagcgactgaaggttgtcaac
gcattcctgaccaccaacaacagcccgctcggcatggtgctggacgccgtcccggtgatc
ccgccggaactgcgccccatggtccagctggacggtggccgcttcgcgacctccgacctc
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgtctcaagcgactgcttgacctg
ggtgctccggagatcatcgtcaacaacgagaagcgcatgcttcaggaagccgttgacagc
ctgttcgacaacggccgccgtggccgtccggtcaccgggccgggcaaccgtccgctgaag
tccctgagcgacatgctcaagggcaagcagggccgcttccgccagaacctcctgggtaag
cgcgttgactactcgggccgttcggttatcgtcgtcggtccgcagctgaagctgcaccag
tgtggcctgcccaagcagatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gttgacctcaaccacgcccagaacatcaagtcggccaagcgcatggttgagcgttaccgt
ccgcaggtctgggacgttctcgaagagatcatcaccgagcaccctgtgctgctgaaccgt
gcacctaccctgcaccgcctcggcatccaggcgttcgaaccccagcttgttgaaggtaag
gcaatccagctgcacccgctggtttgtggcgccttcaacgctgacttcgacggcgaccag
atggcagtccacctgccgctgagccccgaagcccaggctgaggcacgcatcctgatgctg
tcctcgaacaacatcctgaagccgtctgacggccgcccggtgacccttccttcgcaggat
atgatcatcggtctctaccacctgaccaccaaacgtgtcggttcagctggcgaaggccgc
atcttctcctccgtgtcagaagccatcatggcgttcgacctgcacgagctgcacctgaac
tcccaggtcaagatccgccttgagggctttgtcccttacgccggctgggaagctccggaa
ggctgggagccgggtcagaccgctctcgtccagacctccctgggccaggtcatcttcaac
gagaccctgcccgaggactacccgtgggttgaggctgttgctgacaagggcgaactgtcc
cgaatcgtcaacgacctcgccgagcgctacccgaaggttgttaccgcggcaacgctggac
aacctgaaggatgccggtttctactgggccacccgatcaggggtcaccgttgctatctcc
gacatcgaggttccggtcgagaagccggtcatccttgccggttacgaagagcgcgctgcc
aagatccagggccagtacgacaagggcctgatcgacgacgacgagcgtcgccaggaactg
atcgagatctggaacaaggcaaccaacgagatcgcccaggtcatgcgtgacaacctgtcg
ccgatgaacaccatcaaccgcatggtgtcctccggtgcacgtggtaactggatgcaggtc
cgtcagatcgcgggtatccgtggcctggtggccaaccctaagggtgaaatcatcccgcgt
ccgatcaagtcctcctaccgcgagggcctgtcggtgctggaatacttcatcgccacgcac
ggtgcccgtaagggtctggccgacaccgccctgcgtaccgccaactcgggttacctgacc
cgtcgtctggtggacgtctcgcaggacgtcatcgtccgtgaagaggactgcggcaccgaa
cgcggcctcatcactcccattgccgtggctgacgccaacggcgagctggtgctggacgag
aacgtcgagaacagcgcgtacgcccgtaccctggccgtggatgtcgttgactccaagggc
aaggtcctggcaccggccggcactgactgcggcgacgtcgtcattgccgagctgttcgca
gccggcatcaccgaggtcaaggtccgctccgtactcacctgtgagtccagcgtcggcacc
tgcgccctgtgctacggccgttcgttggccaccggcaagaccgtggacatcggtgaggcc
gtgggcatcatcgctgcacagtccatcggtgagccgggtacccagctgaccatgcgtacg
ttccacaccggtggtgctgtttcggccagcggtggcgacgacatcacccagggtctgccc
cgtatccaggagcttttcgaagcccgtactccgaagggtgtcgcaccgattgctgaagca
gccggccgcatcgccatcgaagagtccgagcggcagatgcgcctggtcatcactccggat
gacggcagcgaagagatcgcctacccggtcctgcgccgttcacgtctcctgattgaagac
ggccagcacgtcgcggtgggccagaagctcatcaacggtccggttgaccccaagcaggtt
ctgcgcatcatgggcccccgtgccgcacagaagttcctggtggacgaggtccagggcgtg
taccgcagccagggcatcggtatccacgacaagcacgtcgaggttatcgtccgccagatg
ctgcgccgcgtcacggtcatcgaatcgggtgaatccgacctgctccccggtgagctggcc
gagcgcagccgcttcgaagacgccaaccgccgcgttgtgtccgagggcaagactccggct
tccggacgtccggagctcatgggtatcaccaaggcgtccctggccaccgagtcctggctg
tccgcagcttccttccaggaaaccacccgcgtcctgacgcaggcggccatggaaggcaag
agcgatccgctgctcggcctcaaggaaaacgtcatcatcggtaagctcatccccgccggc
acgggtctaccgcgctacacggaggtcacggtggaaccgactgaagaagcaaaggccaac
ctgttcacgggtcccagcgctttcagcgacttctcctatgacacgctgggcggcgacgga
gctcctgagttccacgccatcccgctggatgactacgatctcggcaacgacttccggtaa
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integrated database retrieval system
