Arthrobacter sp. U41: ASPU41_01550
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Entry
ASPU41_01550 CDS
T05053
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aru
Arthrobacter sp. U41
Brite
KEGG Orthology (KO) [BR:
aru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aru03032
]
ASPU41_01550
03400 DNA repair and recombination proteins [BR:
aru03400
]
ASPU41_01550
Enzymes [BR:
aru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ASPU41_01550
DNA replication proteins [BR:
aru03032
]
Prokaryotic type
DNA Topoisomerases
ASPU41_01550
DNA repair and recombination proteins [BR:
aru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ASPU41_01550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AOT02225
UniProt:
A0A1C9WLX3
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All DBs
Position
complement(315773..316786)
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AA seq
337 aa
AA seq
DB search
MRLRRSNASGRGYRRVAAGTGFSYKDLDGSTVPPGPVRERLEGIGIPPAWTDVWIAPYDN
GHIQATGLDAVGRRQYIYHPGWRERKDRLKFDRSLQLAETLPAARRRVTLDLRSEGLARE
RVLAAAFRMLDSGSLRVGSERYTNENGSHGLATLLCAHVAVRKDEVRLSFPAKSGKTWES
RIDDADLAAVVRQLKRRGGNARLLAYKEGRGWHPVSSQDINQYVKERTGQDFTAKDFRTL
RGTVAAAASLAQSGPQPKVSARKRAVSRAMVDASAVLGNTPSIARKSYVDPRLLDHFAAG
EIIDPKRLDSAESEVRALLYREGDVVPLKAAERKAAG
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctccggcgcagcaacgcgtccggccgcggctaccgccgggtcgcggcgggcacc
ggcttcagctacaaggacctggacggctccactgtcccgcccgggccggtgcgcgagcgg
ttggagggaatcggcatcccgcccgcgtggacggacgtctggatcgcaccgtacgacaac
gggcacatccaggccaccgggctcgacgccgtcggacggcgccagtacatctaccacccg
ggctggcgggagcggaaggaccggctgaagttcgaccggtcgctccagctcgcggaaacc
ctgccggccgcgcgccggcgcgtcaccctggacctgcgctccgagggactcgcccgggag
cgggtgctggccgccgccttcaggatgctggacagcggctcgctgcgggtcggctccgag
cgctacacaaacgaaaacggcagccacggcctcgccaccctgctctgcgcccacgtggcg
gtccgcaaggacgaggtcaggctcagtttccccgccaagagcggcaagacctgggaatca
cggatcgacgacgccgacctcgccgccgtcgtgcgccagctcaagcgccgcggcggcaac
gcccgcctgctggcgtacaaggagggccggggctggcacccggtgtccagccaggacatc
aaccagtacgtcaaggagcgcaccggccaggacttcaccgccaaggacttccgcaccctg
cgcgggacagtcgccgcagccgccagcctggcgcagagcggcccgcagcccaaggtctcg
gcccgcaaacgcgcggtaagccgcgccatggtggacgcgtccgcggtgctgggcaacacg
ccgtcgatcgcccggaaaagctacgtggacccgcggctgctggaccacttcgccgcgggg
gagatcatcgacccgaagcggctggactcggccgaatccgaggtccgtgccctgctctac
cgcgagggcgacgtggtcccgctgaaggcggcggagcggaaagctgcggggtag
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