Arthrobacter sp. U41: ASPU41_01585
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Entry
ASPU41_01585 CDS
T05053
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
aru
Arthrobacter sp. U41
Brite
KEGG Orthology (KO) [BR:
aru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aru03016
]
ASPU41_01585
Enzymes [BR:
aru01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ASPU41_01585
Transfer RNA biogenesis [BR:
aru03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ASPU41_01585
Prokaryotic type
tRNA splicing ligases
ASPU41_01585
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AOT02232
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All DBs
Position
complement(323970..325136)
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AA seq
388 aa
AA seq
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MEVINSKLISWASILDDATRQQALATAQLPIIYPHLALMPDAHLGLGATVGSVIPTLGAV
IPAAVGVDIGCGMIAVRTQYAVKDLRKDRKPLREGIEHAVPLSAGHFNHRISATAAPRID
QLRRLAANARFDPAQYASNWTLQLGSLGSGNHFIEVCADETDAVWLFLHSGSRGVGNKLA
QRHIGEARSMIRSRHITLPHPDLAYLEEGTLEFDRYIRELRWAQHFALLNREEMMDRVVR
QFESWTGGSVREAERINCHHNFTAKERHYGKSVWVSRKGAIRAEAGDPGLIPGSMGTASY
VVVGLGNRASLNSSPHGAGREYSRHAAQKIFTLAELKTAMQGIEFRPSKAFIDEIPAAYK
PIDTVMRDSADLVKIRHKLRQLVNVKGD
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
ttggaagtcatcaacagcaagctgatcagctgggcctcgatcctggacgacgcgacccgc
cagcaggccctggccacggcacagctgcccatcatctatccgcatctggcgctgatgccg
gacgcccatctgggcctgggcgccaccgtgggctccgtcattcccacccttggcgccgtc
atcccggcggccgtgggcgttgacatcggctgcggcatgatcgccgtccgcacacagtat
gccgtcaaggacctgcgcaaggaccggaaaccgttgcgggagggcatcgagcacgccgtc
ccgctgtccgccggccacttcaaccacaggatcagcgccaccgccgcaccccggatagac
caactccggcgcctggcagcgaacgcgcgtttcgaccccgcccagtacgcctcgaactgg
acactgcagctggggtcgcttggctcgggcaaccacttcatcgaggtctgcgcggatgag
acggacgccgtctggctgttcctgcactccggctcccgcggcgtcggcaacaaactcgcg
cagcggcacatcggcgaggcccggagcatgatccggagccggcacatcaccctgccgcac
ccggacctggcctacctcgaggaaggcaccctcgaattcgaccgatacatcagggaactc
cgctgggcccagcacttcgccctgctgaaccgcgaggagatgatggaccgggtggtccgg
cagtttgaatcctggaccggaggctccgtccgcgaggccgaacggatcaactgccaccac
aacttcaccgccaaggaacggcattacggcaagtccgtctgggtctcacgcaaaggagcc
atcagggcggaggcgggggaccccgggctgattccgggctccatgggcaccgcgtcctac
gttgttgtgggcctggggaaccgggcgtccctgaattcctcgccgcacggcgccgggcgg
gaatactcgaggcacgcggcgcagaagatctttaccctggccgagctgaagaccgccatg
cagggcatcgaattccgtcccagcaaggccttcatcgacgagatcccggcggcctacaaa
cccatcgacacggtgatgcgcgactccgcggacctcgtcaaaatacggcacaagctccgc
cagctcgtcaacgttaaaggcgactga
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