Arthrobacter sp. U41: ASPU41_09940
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Entry
ASPU41_09940 CDS
T05053
Name
(GenBank) ABC transporter
KO
K03701
excinuclease ABC subunit A
Organism
aru
Arthrobacter sp. U41
Pathway
aru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ASPU41_09940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aru03400
]
ASPU41_09940
DNA repair and recombination proteins [BR:
aru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ASPU41_09940
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ASPU41_09940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_29
AAA_21
AAA_16
SMC_N
nSTAND1
DnaJ_CXXCXGXG
AAA_25
Anti-TRAP
AAA_33
RsgA_GTPase
AAA_22
Viral_helicase1
MeaB
NTPase_1
cobW
Motif
Other DBs
NCBI-ProteinID:
AOT03602
UniProt:
A0A1C9WRG5
LinkDB
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Position
complement(2154226..2156865)
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AA seq
879 aa
AA seq
DB search
MHSDQHASHPSGPALTGLGADRPADGFVRVRGARENNLRNVDVDVPRDAIVAFTGVSGSG
KSSLAFGTIYAEAQRRYFESVAPYARRLIQQGHNPKVEMISGLPPAVALQQRRGTPSSRS
TVGTVTTLSNSLRMLFSRAGSYPDGAGQLDSDAFSPNTAAGACPECHGLGIAHTVTESSL
VPDTSLSVRDGAIAAWPGAWQGKNLRDILTHLGYDVDTPWRKLPKKDRDWILFTEEQPVV
EVTPQRDRVAKPYKGRFWSAKSYVLHTLADSKSTTMRDRVLRFMETGPCPVCAGSGLTPA
AIAVTFAGRTIAELNAVPMSELAEIIRPTTELKDAGTASRKQSSGEGNEVAVAITRDLLQ
RVTVLLDLGLGYLALGRSTPTLSPGEMQRLRIATQLRSGLFGVIYVLDEPSAGLHPADAE
PLLAVLDQLKSSGNSVFVVEHNMDIVRRADWLVDVGPRAGEGGGEVLYSGPVAGLAEVDA
SVTRPFLFPDGSGPADGSGGADDGGSSTGGTSASGSSAARTSTARTRRDADGWLELRGIS
RHNLRELDADFPLGVLTAVTGVSGSGKSTLVSQVLAEVVGSRLHPEADAAAKAPEDLESE
PAESAEPLSVGPVSGLDRLDRLVKVDQKPIGRTPRSNLATYTGLFDAVRKEFAATDQART
RGFGAGRFSFNVAGGRCETCQGEGFVAVELLFLPGSYGPCPECQGSRYNPETLEVTYRGK
NVAEVLGMTVDAAAEFLAAVPAAARSLQTLREVGLGYLRLGQPATELSGGEAQRIKLATE
LQRAQRGHSLYLLDEPTTGLHPADVELLMAQLHRLVDAGNTVIVVEHEMDVVAAADWVID
LGPAGGDAGGEIIAVGTPAVVARSKKSRTAPYLAAVLGG
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgcacagtgatcagcatgcttcccatccttccggcccggccctgacagggctgggcgcc
gaccgtcccgcggacggctttgtccgggtgcgcggtgcccgggagaacaacctgcggaac
gtggacgtggacgtgccccgcgacgcgatcgtcgcgttcaccggggtttccggctccgga
aagtcctcgctggccttcgggaccatctacgccgaggcccagcgccgctacttcgagtcc
gtggcgccctacgcccgccggctgatccagcagggccacaaccccaaggtggaaatgatc
tccgggctgccgcccgccgtcgcactccagcagcgccgcgggacgcccagttcccgctcc
acggtcggcacggtcaccacgctgtcgaattcgctccggatgctcttctcccgcgccggc
agctaccccgacggcgccggccagctcgactcggacgccttctcccccaacaccgccgcc
ggcgcctgcccggaatgccacggcctcggtatcgcgcacaccgtcaccgagtcctctttg
gtcccggacacgtcactgagcgtccgcgacggcgcgatcgccgcctggcccggggcctgg
cagggcaagaacctgcgcgacatcctcacgcacctgggctacgacgtcgataccccctgg
cggaagctgcccaagaaggaccgcgactggatcctcttcaccgaggaacagcccgtggtg
gaggtaacgccccagcgcgaccgcgtcgcgaagccgtacaagggccgtttctggagtgcc
aagagctacgtgctgcacaccctcgccgattccaagagcaccaccatgcgcgaccgcgtg
ctgcgctttatggaaaccggaccgtgcccggtctgcgccggcagcggcctgaccccggcc
gccatcgccgtgacgttcgcgggcagaacgatcgccgaactcaacgccgtccccatgagc
gaactggccgaaattatccgtcccaccaccgagctcaaagacgccggcaccgcctcgcgc
aagcagagctccggcgagggcaacgaggtggccgttgccatcacccgggacctgctgcag
cgcgtcaccgtcctgctggacctcggcctgggctacctcgcgctgggccggtccacccct
acactctcccccggcgagatgcagcggctgcggatcgccacccagctgcgctccggcctc
ttcggcgtgatctatgtgctggatgagccctccgccgggctacatccggccgacgccgaa
ccgctcctggcggtcctggaccagctcaagtcctccggcaactcggtgttcgtggtggag
cacaacatggacatcgtccgccgcgccgactggctggtcgacgtcggcccgcgcgccggt
gaaggcggcggcgaggtgctctacagcggcccggtcgccgggctcgccgaggtggacgcg
tcggtgacccggccgttcctgttcccggacggatcaggtccagcggacggctctggtgga
gcggacgacggcggttcctccaccggtggcacgtcagcatccggcagctccgctgcccgc
acctccaccgcccgcacccgccgggacgctgacggctggctggagctgcgcggcatcagc
cgccataacctgcgcgagctcgacgccgatttcccgctcggtgtgctgaccgcggtcacc
ggcgtgtccggctccggaaagtcgaccctggtcagccaggtgctcgccgaggtcgtggga
agccggctgcatccggaagccgacgccgcggcgaaagccccggaggacctggagtccgaa
cccgcggaatccgccgagccgctcagtgtcggcccggtctccgggctggaccggctggac
cggctcgtcaaggtggaccagaagccgatcggccgcaccccgcgctccaacctcgccacg
tacaccgggctgttcgacgcggtccgcaaggaattcgcggcgacggaccaggcccggacc
cgcggcttcggtgcgggccgcttctccttcaacgtcgcaggcggccgctgcgagacctgc
cagggcgagggcttcgtcgccgtcgaactgctgttcctgcccggcagctatggcccctgc
ccggaatgccagggctcgcgctacaacccggaaacccttgaggtgacctaccgcggcaag
aacgtggcggaggtcctcggcatgacggtcgacgccgccgcggagttcctggccgcggtc
cccgccgccgcacgcagcctgcagaccctccgcgaggtgggcctgggctacctgaggctg
ggccagcccgccacggaactctccggcggcgaagcgcagcgcatcaaactcgccaccgaa
ctgcagcgtgcccagcgcgggcattcgctctacctgctggacgagcccaccaccggactg
cacccggccgacgtcgaactcctgatggcgcagctgcaccggctggtcgacgccggaaac
accgtgatcgtggtggaacacgagatggacgtcgtggccgccgcggactgggtgatcgat
cttggcccggccgggggcgacgccggcggcgagatcatcgcggtggggacgccggccgtc
gtcgcccggtccaaaaagagccgcacggcgccgtatcttgccgcggtgctcggcggctga
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