Arthrobacter sp. U41: ASPU41_13220
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Entry
ASPU41_13220 CDS
T05053
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aru
Arthrobacter sp. U41
Pathway
aru03030
DNA replication
aru03430
Mismatch repair
aru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ASPU41_13220
03430 Mismatch repair
ASPU41_13220
03440 Homologous recombination
ASPU41_13220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aru03032
]
ASPU41_13220
03400 DNA repair and recombination proteins [BR:
aru03400
]
ASPU41_13220
Enzymes [BR:
aru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ASPU41_13220
DNA replication proteins [BR:
aru03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ASPU41_13220
DNA repair and recombination proteins [BR:
aru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ASPU41_13220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AOT04140
LinkDB
All DBs
Position
2904523..2908080
Genome browser
AA seq
1185 aa
AA seq
DB search
MTSSNDSFVHLHNHTEYSMLDGAARLSELFDETERLGMPALATTDHGYLFGAFDFWKRAT
DQGIKPIIGVEAYVTPGTARTDKTRVRWGEENQRKDDISGGGAYTHMTLLSYNNVGMRNL
FRASSIASLDSVFGKWPRLDRELLNTYSEGLIATTGCPSGEVQTRLRLGQYREAVEAAAE
FRDIFGAENYFCELMDHGLDIERRVTGDLLRLAKELNLPLVATNDLHYTHEHDAKAHEAL
LAIQSGSTLLEPTYDNGGSRFAFSGSGYYLKSPQEMRELFRDHPEACDNTLLIAERCEVS
FNTGANYMPRFPCPEGEDETSWLVKEVDKGLRYRYPQGIPDKVRTQADYELGVITSMGFP
GYFLVVADFINWAKNNGIRVGPGRGSGAGSMVAYAMRITDLDPLHHGLIFERFLNPDRVS
MPDFDVDFDDRRRSEVIDYVTRKYGDERVAMIVTYGTIKTKQALKDSSRVLGYPFSMGEQ
LTKALPPAVMAKDIPLADIQNKDSKRYSEAADFRQLIATDPEAAKVFETALGIEGLKRQW
GVHAAGVIMSSDPIIDVIPVMRRFQDGQVITQFDYPTSEGLGLIKMDFLGLRNLTIISDA
LENIKMNRGEDLDLEALALDDVASYELLARGDTLGVFQLDGGPMRSLLKLMKPDNFEDIS
AVLALYRPGPMGANAHTDYALRKNKIQDVIPIHPELEEPLSEILGGTYGLIVYQEQVMAV
AQKLAGYTLGQADILRRAMGKKKKSELDKQFAGFSQGMQDNGYSMAAVKTLWDILLPFSD
YAFNKAHSAAYGVISYWTAYLKAHYAPEYMAALLTSVGDDKDKSAIYLNECRRMGITVLP
PDVNESALNFTPVGTDIRFGMGAIRNVGVNAVEAMVAAREKEGAYTSFKDYLVKVPAVVC
NKRTIESLIKAGAFDSLNHHRRALAMIHEEAIDSVITLKRNEAIGQFDLFAGFDEAESEA
SLSIEIPDLPEWEKKDKLSFERDMLGLYVSDHPLQGLEGVLSQHADQSITTLIAEDGPHD
GAIVTIAGMITSLSRRIAKASGNAYARAEIEDLGGSVEVMFFGQVYGPIASVLAEDLIVV
VKGRLQRRDDGAVALNCMELSVPDLSEGLNGPLVITMQTHKATEAVVTELGDVLRTHRGK
SEVRVHLQGDSRVEIMGLPVHLRVNPSPSLFGDLKVLLGPTCLDN
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
gtgacttccagcaacgactcgtttgtccatctccacaaccacaccgagtactcgatgctg
gacggcgccgcccggcttagtgaactgttcgacgaaaccgagcggctcggcatgccggcc
ctcgccacgaccgaccacggctacctgttcggcgcctttgatttctggaaacgggccact
gaccagggcatcaagccgatcatcggcgtcgaggcctatgtcactcccgggaccgcccgc
acggacaagacccgtgtccgctggggcgaggagaaccagcgcaaggacgacatctccggc
ggcggcgcctacacccacatgaccctgctcagctacaacaatgtgggcatgcggaacctg
ttccgtgcctcctcgatcgcctccctggactcggtcttcggcaaatggccccggctggac
cgcgagctgctgaacacctactccgaagggctgatcgccacgaccggctgcccgtccggg
gaggtccagacccggctccggctcggccagtaccgcgaggcggtcgaggcggccgccgag
ttccgcgacatcttcggcgccgaaaactacttctgcgaactcatggaccacggcctggat
atcgagcggcgcgtcaccggggacctgctgcggctggccaaggaactgaacctgcccctg
gtggccaccaatgacctccactacacgcacgagcacgacgcgaaggcgcacgaggccctg
ctggccatccagtcgggttccaccctgctggagccgacgtacgacaacggcggctcgcgc
ttcgccttctccggcagcgggtactacctgaaatccccgcaggaaatgcgggagctgttc
cgcgaccaccccgaggcatgcgacaacacgctcctgatcgccgagcgctgcgaggtttcg
ttcaacaccggcgccaactacatgccccggttcccctgcccggagggggaggacgaaacg
tcctggctggtcaaggaagtcgacaagggactccgctaccgctacccccagggcatcccg
gacaaggtccgcacccaggctgactacgagctcggcgtcatcacgtccatgggtttcccc
ggctacttcctggtggtggccgacttcatcaactgggccaagaacaacggcatccgggtc
ggtcccggacgcggctcgggcgccggctccatggtggcgtatgccatgcgcatcaccgac
ctcgatccgctgcaccacgggctgatcttcgagcgattcctcaacccggaccgggtctcc
atgcctgacttcgacgtcgacttcgatgaccggcgccgctccgaggtcattgactacgtc
acgcgcaaatacggtgacgaacgcgtcgcgatgatcgtcacctacggcaccatcaagacc
aagcaggccctcaaggactcatcacgcgtgctgggctacccgttcagcatgggcgaacag
ctgaccaaggcgctgccgcccgccgtgatggccaaggacatcccgctggccgacatccag
aacaaggactccaagcgctacagcgaggccgctgacttccgccagctgatcgccacggac
ccggaagccgccaaggtgttcgagacggcgctcggcatcgagggactgaaacgccagtgg
ggtgtccacgcggccggcgtcatcatgtcctccgaccccatcattgacgtcatccccgtc
atgcgccgcttccaggacggccaggtcatcacgcagttcgactacccgacttccgaaggc
ctcggcctgatcaagatggacttcctgggcctgcggaacctgacgatcatttccgatgcc
ctggaaaacatcaaaatgaaccgcggcgaggaccttgacctggaggcccttgccctggac
gacgtggcgtcctacgagctgcttgcccgcggcgacaccctcggcgtgttccagctcgac
ggcggcccgatgcggtcactgctgaagctgatgaaacctgacaacttcgaagacatttcc
gccgtcctggccctctaccggcccggacccatgggtgccaacgcgcacaccgactacgcc
ctgcgcaaaaacaaaatccaggacgtcatcccgatccacccggagctcgaggaaccgctc
tccgagatcctcggcggcacctacggcctgatcgtgtaccaggagcaggtcatggccgtg
gcgcagaagctcgccggctacaccttgggccaggccgacatcctgcgccgcgcgatgggc
aaaaagaagaaatcggaactggacaagcagttcgccggtttctcccagggcatgcaggac
aacggctactcgatggccgcggtcaagaccctctgggacatcctgctcccgttctccgac
tacgccttcaacaaggcgcactcggccgcgtacggcgtgatctcctactggaccgcctac
ctcaaggcgcactacgcgccggagtacatggcggccctgctcaccagcgtcggcgacgac
aaggacaaatcggcgatctacctcaacgaatgccggcggatgggcatcaccgtgctccct
ccggacgtcaacgagtcagcgctgaacttcaccccggtcggaaccgatatccgcttcggc
atgggcgccatccgcaacgtcggcgtcaacgccgtcgaggccatggtcgcggcgcgggaa
aaggaaggcgcctacacgtcgttcaaggactacctggtgaaagtcccggcagtggtgtgc
aacaagcgcaccatcgagtcgctgatcaaggccggcgccttcgactcgctcaatcaccac
cggcgcgccctggcgatgatccacgaagaagccatcgactcggtcatcaccctcaagcgc
aacgaggcgatcggccagttcgaccttttcgccggtttcgacgaagccgaatccgaggca
tccctcagcatcgaaatcccggacctgcccgagtgggaaaaaaaggacaaactctccttc
gaacgggacatgctgggcctgtacgtctcggaccacccgctgcagggcctcgaaggggtc
ctgagccagcacgccgaccagtccatcaccacgctcatcgccgaggacggcccgcacgac
ggcgccatcgttaccatcgcgggcatgatcacctcactgagccggcggatcgcgaaagcc
agtggcaacgcgtacgcccgcgcggagatcgaggacctcggcgggtccgtcgaggtcatg
ttcttcggccaggtctacggccccatcgcctcggtgctggcggaagacctcatcgtggtg
gtcaagggacggctgcagcgccgggacgacggcgccgtcgcgctgaactgcatggaactc
tccgtccctgacctcagtgagggcctgaacggcccgctggtgatcaccatgcagacccac
aaggcgaccgaagccgtcgtgaccgagctcggcgacgtgctccggacccaccgcggcaag
tccgaggtccgggtgcacctgcagggcgactcccgggtggagatcatgggcctgcccgtc
catctgcgggtgaaccccagcccctccctgttcggggacctcaaggtgcttctcggcccg
acctgcctggacaactag
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