Arthrobacter sp. U41: ASPU41_13570
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Entry
ASPU41_13570 CDS
T05053
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aru
Arthrobacter sp. U41
Brite
KEGG Orthology (KO) [BR:
aru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aru03016
]
ASPU41_13570
Enzymes [BR:
aru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ASPU41_13570
Transfer RNA biogenesis [BR:
aru03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ASPU41_13570
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AOT04204
UniProt:
A0A1C9WSL8
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All DBs
Position
complement(2997157..2998551)
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AA seq
464 aa
AA seq
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MTPHIPEITTAGAVQSTTETADTTAHIAVDGFDSLVPEVIDLDSPRDGVPLVIETQSGLE
RCAAALAAGHGPAGVDAERASGFRYGQRAFLVQIRREGSGTWLIDPEPFGNLDIVNDALR
GVEWILHAASQDLPCLAELGMWPDKLFDTELAARLAGLPRVGLAAVIEQLLGFGLAKEHS
AADWSTRPLPEPWLRYAALDVEVLTELREELIELLVADGKLDYAEQEFAAILEAGQAPPR
VDPWRKTSGLHQIRDRRQLAAVRELWLERDSLAQKRDVAPGRLIPDSALVAAAKAMPATV
PQLLGTKGFHGRAAQREAPRWLRCISAARTLEELPPLHLPTNAPPPPRVWADRDPEAAAR
LATARPLLQAKAEELNMPVENLLTPDYLRRVTWRPPMEPSEEGIAEELANLGARQWQIEL
VAPLIAEAFLNPQPLPAKEAKTATAIPDPTAAAAPAGAAPDTAH
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgacccctcatattccggaaatcaccacggccggcgccgttcaaagtacgaccgagacc
gctgacaccacagcccacatcgcggtggacggcttcgacagcctggtccccgaggttatc
gacctcgattccccccgcgacggcgtgcctctcgtcatcgaaacccagtccggcctggaa
cgctgcgccgcggccctcgccgcaggccacggccccgcgggggtagacgccgaacgcgct
tccggtttccgctacggccagcgcgctttcctggtccagatccgccgcgaaggctccggc
acgtggctgatcgatccggagcccttcgggaacctggacatcgtcaacgacgccctgcgc
ggtgttgaatggatcctgcacgcggccagccaggacctgccctgcctggccgaactcggc
atgtggccggacaagctctttgacaccgaactcgccgcccgcctcgccgggcttccccgg
gtgggccttgccgcggtgatcgaacagctcctgggctttggcctcgcgaaggaacactca
gcggccgactggtccacccgtccgctgccggaaccctggctgcgctacgccgccctcgac
gtcgaggtcctcaccgaactacgcgaggagctcattgagctccttgtggccgacggcaag
ctcgattatgccgaacaggaattcgccgccatcctcgaggccggccaggcgccgccccgc
gtcgacccgtggcgcaagacctccgggctgcaccagatccgcgaccgtcgccagctggcc
gcggtccgcgaactgtggctcgaacgcgactcgctggcacaaaagcgcgacgtggcgccc
ggacggctgatccccgactccgccctcgtggccgccgccaaggccatgcccgccacagtg
ccgcaactgctcggcaccaaaggcttccacggccgcgcggcccagcgtgaggcaccgcgg
tggctgcgctgcatcagcgccgcccggactcttgaggagctccctcccctgcacctgccc
accaacgctcccccgccgccgcgcgtgtgggccgaccgggacccggaggccgccgcacgg
ctggccaccgcccggcccctgctgcaggccaaggccgaggaactgaacatgccggtggag
aacctgctgacgccggattacctccgccgcgttacctggcgcccgccgatggaacccagc
gaggaaggcatcgcggaggagttggcgaaccttggggcccgccagtggcagattgaactc
gtcgcgccgctgatcgccgaggcgttcctgaacccgcagccgctgccggccaaggaagcc
aaaaccgcgacagccatacctgaccccacagctgcagccgcacctgccggggcagcgccg
gacacggcgcactag
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