Arthrobacter sp. U41: ASPU41_18350
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Entry
ASPU41_18350 CDS
T05053
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
aru
Arthrobacter sp. U41
Pathway
aru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ASPU41_18350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aru03400
]
ASPU41_18350
Enzymes [BR:
aru01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ASPU41_18350
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ASPU41_18350
DNA repair and recombination proteins [BR:
aru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ASPU41_18350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
HpcH_HpaI
DnaJ_CXXCXGXG
FlhC
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AOT04989
UniProt:
A0A1C9WVF8
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All DBs
Position
complement(4023623..4024594)
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AA seq
323 aa
AA seq
DB search
MPELPEVEVVRRGLVSWVRGRTITAVEVVDPRSVRRHTLGPEDFAGNLEGARVLDVVRRG
KFLWLPLADTPATDSGDGPAAPFAPTVALMAHLGMSGQLLMQDSSVSDEKHLKVRLHLSP
ADGMPQQLRFVDQRIFGGLFLTSLIPTADGGPGGLAAAPLPLIAEEASHIARDPLDPYFS
FDEFYRRLRTRKTGLKRALLDQGLVSGIGNIYADESLWKARLHFARPTDTLRRAEAERVL
DAAREVMTDALAAGGTSFDSLYVNVNGASGYFDRSLNAYGREGQECKRCAAAGLVSVMKR
DQFMNRSSYSCPVCQPPPRNGRW
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaactgcccgaggtcgaagttgtccgccgcggccttgtgagctgggtgcggggc
cggaccatcaccgctgttgaggtggtggatccgcgctccgtccgccggcatacgctcggc
ccggaggacttcgcgggcaaccttgagggcgcccgcgtccttgacgtggtccggcgcgga
aagttcctttggctgccgctggccgatactccggcaactgactccggcgacggcccggcc
gcaccctttgcccctacggtggctctcatggcgcacctgggcatgtccggacagctgctg
atgcaggactcctcagtttccgacgagaagcacttgaaggtgcgcctgcacctcagcccc
gccgatggcatgccgcagcagctccggttcgtggatcagcggatctttggcgggctcttc
ctcacctcgctgatccccacggcggacggcggtcccggcggcctcgccgcagcgccgctg
cctctcatcgctgaggaagcctcccacatcgcgcgggacccgctggatccgtacttctcc
ttcgatgagttctaccggcgcctgcggacccgcaagacaggcctcaaacgcgccctgctg
gaccaggggctcgtctcgggaatcggtaacatctacgcggacgagtccctctggaaggca
cggctgcacttcgcccggcccacggacacgcttcggcgggcggaggctgagcgtgtcctg
gacgccgcgcgcgaggtgatgaccgacgccctggcggccggcggcaccagctttgactcg
ctgtatgtcaacgtcaatggggcctccggctacttcgaccgctcgctcaacgcctacgga
cgcgagggccaggaatgcaaacgctgcgccgccgccggtttggtcagcgtgatgaaacgg
gaccagttcatgaaccgctcctcctattcgtgcccggtctgccagccgccgccgcgtaac
gggcgctggtag
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